Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80002 | Canola | cytosol | 11.16 | 100.0 |
| CDX80001 | Canola | nucleus | 79.61 | 98.8 |
| CDY42023 | Canola | nucleus | 94.42 | 93.06 |
| AT2G46250.1 | Thale cress | nucleus | 72.09 | 63.46 |
| Bra027683.1-P | Field mustard | nucleus | 32.52 | 23.26 |
| Bra025484.1-P | Field mustard | nucleus | 32.77 | 22.69 |
| Bra006620.1-P | Field mustard | nucleus | 17.48 | 15.96 |
| Bra034827.1-P | Field mustard | plastid | 23.3 | 15.64 |
| Bra001412.1-P | Field mustard | nucleus | 12.38 | 14.7 |
| Bra002404.1-P | Field mustard | nucleus | 16.99 | 14.46 |
| Bra018866.1-P | Field mustard | nucleus | 22.09 | 13.52 |
| Bra035788.1-P | Field mustard | mitochondrion | 16.99 | 10.99 |
Protein Annotations
Description
AT2G46250 (E=2e-103) | myosin heavy chain-related
Coordinates
chrA05:-:780745..782235
Molecular Weight (calculated)
47718.8 Da
IEP (calculated)
9.629
GRAVY (calculated)
-1.057
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MERECEGEGD IEKKLRRSFY MGNCSKRAGP STPPPTWRLG ASSSKEFLVN SDVSVRKLCA ELWETEHFRP PVGLPRCRRR DSDVDSPCDH QPPSRGTSLR
101: RQIDDHRLVQ RHGDLLEPIT PSSSSNHSLE VVKRKPAFSQ TGSSMAAKSA SYGLGSSTKL LKVLNRIWSL EEQNTANTSL VKALKMELDE CRAEIKEVQH
201: REKQSYRRVC KKKEEEEEEI KDVLRSMKKE LDEEREVRKK SESMHRKLTR ELCEAKQCLT KALKDLENER KERVVVEDLC DEFAKTVKDY EDKERRRRSH
301: SSQSDSGYIH QRVCLKELEE GLKRRSRRDN KLQLKRSDQV LNLSMSSEGD KIHPEVGTPR KVDDLEMSRT FSKSVMVREE SRSLKDKLME ARVESRRLRS
401: LKSTPSHPVQ AI
101: RQIDDHRLVQ RHGDLLEPIT PSSSSNHSLE VVKRKPAFSQ TGSSMAAKSA SYGLGSSTKL LKVLNRIWSL EEQNTANTSL VKALKMELDE CRAEIKEVQH
201: REKQSYRRVC KKKEEEEEEI KDVLRSMKKE LDEEREVRKK SESMHRKLTR ELCEAKQCLT KALKDLENER KERVVVEDLC DEFAKTVKDY EDKERRRRSH
301: SSQSDSGYIH QRVCLKELEE GLKRRSRRDN KLQLKRSDQV LNLSMSSEGD KIHPEVGTPR KVDDLEMSRT FSKSVMVREE SRSLKDKLME ARVESRRLRS
401: LKSTPSHPVQ AI
001: MERECEEGEM EKKLRRSFMG YTRRAGPSTP PPTWRLEFSP PRVGATKEFL ANSEDSVRKL CADLWETEQF RQRIELRRCR RRDSDVESHS RSPLHDHPPS
101: RASLRRQIAA TDDYRNGDLL QPISPASCSS SSSSLQVVVR KPAFSQTGSS AVKSASYGLG SSTKLLKVLN RIWSLEEQNT ANMSLVRALK MELDECRAEI
201: KEVQQRKKLS DRPLRKKKEE EEVKDVFRSI KRELDDERKV RKESETLHRK LTRELCEAKH CLSKALKDLE KETQERVVVE NLCDEFAKAV KDYEDKVRRI
301: GKKSPVSDKV IVQIAEVWSD QRLQMKLEED DKTFLLRAKE KSRSQSSKGS GLRAKPDDSV SMHQRVCLKE LEEGLEKRTR RDNKLQLKKS SGQVLNLSMS
401: SEGDKIHPES SPRNVDDHES QEKSRTFSKN HPRNVNVMIR EDNHRTLKDK LMEARVESRR LRSSLKPE
101: RASLRRQIAA TDDYRNGDLL QPISPASCSS SSSSLQVVVR KPAFSQTGSS AVKSASYGLG SSTKLLKVLN RIWSLEEQNT ANMSLVRALK MELDECRAEI
201: KEVQQRKKLS DRPLRKKKEE EEVKDVFRSI KRELDDERKV RKESETLHRK LTRELCEAKH CLSKALKDLE KETQERVVVE NLCDEFAKAV KDYEDKVRRI
301: GKKSPVSDKV IVQIAEVWSD QRLQMKLEED DKTFLLRAKE KSRSQSSKGS GLRAKPDDSV SMHQRVCLKE LEEGLEKRTR RDNKLQLKKS SGQVLNLSMS
401: SEGDKIHPES SPRNVDDHES QEKSRTFSKN HPRNVNVMIR EDNHRTLKDK LMEARVESRR LRSSLKPE
Arabidopsis Description
At2g46250/T3F17.10 [Source:UniProtKB/TrEMBL;Acc:O82344]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.