Factsheet for Bra001412.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000304.1-P
Bra005847.1-P
Bra007261.1-P
Bra009093.1-P
Bra010996.1-P
Bra011368.1-P
Bra012474.1-P
Bra012880.1-P
Bra014221.1-P
Bra014370.1-P
Bra014678.1-P
Bra017007.1-P
Bra018304.1-P
Bra020748.1-P
Bra021651.1-P
Bra022807.1-P
Bra024741.1-P
Bra030909.1-P
Bra032645.1-P
Bra033247.1-P
Bra033505.1-P
Bra033870.1-P
Bra035030.1-P
Bra036850.1-P
Bra037960.1-P
Bra039652.1-P
Bra039992.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11590.1	Bra032645.1-P	AT1G01630.1	21798944
AT3G11590.1	Bra033247.1-P	AT1G01630.1	21798944
AT3G11590.1	Bra010996.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra012474.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra024741.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra035030.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra039992.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra033870.1-P	AT1G31870.1	21798944
AT3G11590.1	Bra014221.1-P	AT1G49850.1	21798944
AT3G11590.1	Bra039652.1-P	AT1G49850.1	21798944
AT3G11590.1	Bra014370.1-P	AT1G54060.1	21798944
AT3G11590.1	Bra030909.1-P	AT1G54060.1	21798944
AT3G11590.1	Bra037960.1-P	AT1G54060.1	21798944
AT3G11590.1	Bra017007.1-P	AT2G19650.1	21798944
AT3G11590.1	Bra018304.1-P	AT2G30580.1	21798944
AT3G11590.1	Bra021651.1-P	AT2G30580.1	21798944
AT3G11590.1	Bra022807.1-P	AT2G30580.1	21798944
AT3G11590.1	Bra000304.1-P	AT2G43370.1	21798944
AT3G11590.1	Bra020748.1-P	AT3G06430.1	21798944
AT3G11590.1	Bra012880.1-P	AT3G50910.1	21798944
AT3G11590.1	Bra036850.1-P	AT3G50910.1	21798944
AT3G11590.1	Bra007261.1-P	AT3G56680.1	21798944
AT3G11590.1	Bra014678.1-P	AT3G56680.1	21798944
AT3G11590.1	Bra033505.1-P	AT4G15730.1	21798944
AT3G11590.1	Bra011368.1-P	AT4G32660.1	21798944
AT3G11590.1	Bra005847.1-P	AT5G05190.1	21798944
AT3G11590.1	Bra009093.1-P	AT5G05190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73866	Canola	cytosol	95.68	89.97
CDY56601	Canola	cytosol, golgi, plastid	94.81	89.16
Bra034827.1-P	Field mustard	plastid	79.83	45.11
AT3G11590.1	Thale cress	plastid	80.4	44.86
KRG96225	Soybean	nucleus	58.21	30.84
VIT_08s0007g02790.t01	Wine grape	plastid	58.21	30.7
KRH67971	Soybean	plastid	57.35	30.15
PGSC0003DMT400072353	Potato	plastid	54.18	28.7
Solyc10g083190.1.1	Tomato	plastid	52.16	27.38
Os02t0506100-00	Rice	plastid	25.36	20.18
HORVU2Hr1G069400.8	Barley	nucleus	26.8	18.27
Bra006620.1-P	Field mustard	nucleus	22.77	17.52
Os04t0382800-00	Rice	nucleus	28.24	17.16
EES11990	Sorghum	nucleus	27.95	17.08
Zm00001d003996_P001	Maize	nucleus	27.67	16.87
GSMUA_Achr6P16290_001	Banana	nucleus	29.97	16.86
TraesCS2A01G282200.1	Wheat	nucleus	27.38	16.78
Bra002404.1-P	Field mustard	nucleus	23.34	16.74
Zm00001d025208_P002	Maize	nucleus	28.24	16.72
TraesCS2B01G299400.1	Wheat	nucleus, plastid	26.8	16.7
TraesCS2D01G281000.1	Wheat	nucleus, plastid	26.8	16.43
GSMUA_Achr6P08260_001	Banana	nucleus	27.09	16.4
TraesCS7D01G134000.1	Wheat	nucleus	24.78	14.85
TraesCS7B01G035800.1	Wheat	nucleus	24.5	14.71
TraesCS7A01G134600.1	Wheat	nucleus	24.5	14.68
Zm00001d000402_P001	Maize	mitochondrion	21.9	13.87
KXG30263	Sorghum	mitochondrion	23.34	13.02
Bra027683.1-P	Field mustard	nucleus	21.33	12.85
Bra004552.1-P	Field mustard	nucleus	14.7	12.38
Bra025484.1-P	Field mustard	nucleus	21.04	12.27
Bra018866.1-P	Field mustard	nucleus	22.19	11.44
Bra035788.1-P	Field mustard	mitochondrion	20.75	11.3

Protein Annotations

EnsemblPlants:Bra001412.1	EnsemblPlants:Bra001412.1-P	EnsemblPlantsGene:Bra001412	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF7
SEG:seg	UniParc:UPI0002540721	UniProt:M4CB33	MapMan:35.2	:	:

Description

AT3G11590 (E=6e-056) | unknown protein

Coordinates

chrA03:+:16260075..16261742

Molecular Weight (calculated)

39746.9 Da

IEP (calculated)

8.587

GRAVY (calculated)

-0.982

Length

347 amino acids

Sequence
(BLAST)

001: MEGTGSRQRK GSSTAQKLRL GDCNVEAKNH VSNGSFMDIH LRSMNKRLNV VCSMQIETRS RAVTPTGTTM GVKTRLKECS NALTTSKELL KIINRMWGQE
101: DRPSSSTSLV SALHSELERA RLQVNQLIHE HNKQENNITY LMKRFAEEWK SNEQEVVEAA IESVAGELEA ERKLRRRSER LNKKLGKELA ETKAALMKVK
201: EEVEKEREML QLADALREER VQMKLSEYMN HHVEEDGEVE DEHEEDDDRH SIELNIDKSY KWPYGECKSL YLQRSISDWV VQSGKLEKSG EGYLDDKQGY
301: KTNKASSKDH HLLSGPRLSN FRGGSVPKSR LSDAAKGENQ SARRSRW

Best Arabidopsis Sequence Match ( AT3G11590.1 )
(BLAST)

001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW

Arabidopsis Description

At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.