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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002404.1-P
Bra004527.1-P
Bra004582.1-P
Bra005852.1-P
Bra006620.1-P
Bra009112.1-P
Bra013746.1-P
Bra016980.1-P
Bra023148.1-P
Bra027585.1-P
Bra028759.1-P
Bra029810.1-P
Bra032712.1-P
Bra039275.1-P
Bra039276.1-P
Bra039871.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30580.1 Bra023148.1-P AT1G30860.1 21798944
AT2G30580.1 Bra039871.1-P AT1G30860.1 21798944
AT2G30580.1 Bra004582.1-P AT2G40620.1 21798944
AT2G30580.1 Bra016980.1-P AT2G40620.1 21798944
AT2G30580.1 Bra004527.1-P AT2G46550.1 21798944
AT2G30580.1 Bra039275.1-P AT2G46550.1 21798944
AT2G30580.1 Bra039276.1-P AT2G46550.1 21798944
AT2G30580.1 Bra013746.1-P AT3G09980.1 21798944
AT2G30580.1 Bra027585.1-P AT3G09980.1 21798944
AT2G30580.1 Bra029810.1-P AT3G09980.1 21798944
AT2G30580.1 Bra032712.1-P AT4G13540.1 21798944
AT2G30580.1 Bra005852.1-P AT5G05410.1 18552202
AT2G30580.1 Bra009112.1-P AT5G05410.1 18552202
AT2G30580.1 Bra028759.1-P AT5G05410.1 18552202
AT2G30580.1 Bra002404.1-P AT5G22310.1 21798944
AT2G30580.1 Bra006620.1-P AT5G22310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022807.1-P Field mustard cytosol 17.9 90.0
CDX97807 Canola nucleus 92.9 78.61
CDY29659 Canola nucleus 93.47 78.15
Bra018304.1-P Field mustard nucleus 74.72 60.88
AT2G30580.1 Thale cress nucleus 72.44 60.71
PGSC0003DMT400013629 Potato nucleus 36.65 44.03
VIT_07s0141g00610.t01 Wine grape nucleus 51.7 42.33
PGSC0003DMT400038984 Potato nucleus 48.86 40.0
KRG95629 Soybean nucleus 48.01 39.49
Solyc06g008600.2.1 Tomato nucleus 46.88 39.47
KRH67309 Soybean nucleus 49.43 39.1
Solyc09g065990.2.1 Tomato nucleus 47.73 39.07
Solyc06g084040.2.1 Tomato nucleus 45.74 37.35
KRH71326 Soybean mitochondrion, nucleus 44.89 36.66
Os12t0600200-03 Rice cytosol, nucleus 35.8 36.63
KRH32110 Soybean nucleus 44.03 36.13
PGSC0003DMT400051660 Potato nucleus 45.74 35.62
GSMUA_Achr9P10710_001 Banana nucleus 39.77 35.18
GSMUA_Achr5P03230_001 Banana nucleus 38.64 30.91
Bra015525.1-P Field mustard cytosol 35.23 29.59
Bra015526.1-P Field mustard nucleus 20.45 29.39
GSMUA_Achr4P17750_001 Banana nucleus 32.39 29.31
TraesCS5B01G382100.1 Wheat nucleus 41.19 28.1
TraesCS5D01G388500.1 Wheat nucleus 41.48 28.08
HORVU5Hr1G093720.3 Barley nucleus 41.48 28.02
TraesCS5A01G378600.1 Wheat nucleus 40.06 27.76
KXG37982 Sorghum nucleus 39.2 26.74
TraesCS5A01G381800.1 Wheat mitochondrion 28.12 26.4
TraesCS5D01G391100.1 Wheat mitochondrion 28.12 26.4
Zm00001d030985_P001 Maize nucleus 35.23 26.05
Zm00001d041405_P001 Maize nucleus 35.8 25.93
TraesCS5B01G385300.1 Wheat mitochondrion 28.98 25.5
Zm00001d033322_P001 Maize nucleus 37.5 25.1
TraesCS5A01G058000.1 Wheat nucleus 33.24 24.79
TraesCS5D01G069800.1 Wheat nucleus 33.24 24.79
TraesCS5B01G065600.1 Wheat cytosol 32.1 23.94
HORVU5Hr1G014430.6 Barley nucleus 31.82 23.63
Os03t0632800-01 Rice nucleus 28.12 22.92
OQU79520 Sorghum nucleus 35.23 22.46
Os03t0741700-00 Rice cytosol 12.22 22.4
HORVU5Hr1G094160.2 Barley plastid 27.27 21.67
KXG37592 Sorghum mitochondrion, nucleus 29.26 21.11
Zm00001d013303_P001 Maize nucleus 22.16 20.05
Zm00001d033967_P001 Maize nucleus 19.32 17.8
Bra001901.1-P Field mustard nucleus 22.73 17.28
Protein Annotations
EnsemblPlants:Bra021651.1EnsemblPlants:Bra021651.1-PEnsemblPlantsGene:Bra021651PANTHER:PTHR10825PANTHER:PTHR10825:SF70SEG:seg
UniParc:UPI00025447D6UniProt:M4DYQ5MapMan:12.3.5.1.1.1:::
Description
AT2G30580 (E=2e-125) DRIP2 | DRIP2 (DREB2A-INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding
Coordinates
chrA04:+:13655637..13657542
Molecular Weight (calculated)
39916.3 Da
IEP (calculated)
10.651
GRAVY (calculated)
-0.927
Length
352 amino acids
Sequence
(BLAST)
001: MNYFWPDHIL QDLRAKIFPL KRKRDKDLEI TLPARRKERS ISSLVVNTPR LSAQTGTTGK RTAKSLMRKD ARGSSGSFTK RGVKKEEDHH TESGSSPETL
101: KKFTQKKRQS SYAEANQSVS NRRNKDVAEP WDSLHLINFL VDVANGTKPS SSSQGLDPKS EHGNASHIDV QGNKTKTKDH KRKWKLEEEN TTNGDPTTTE
201: TATVKRTRRT RRKRSSAFGD PRTPPLPDAE SLKQERRNGP VWFSLVASNN QEGETSLPQI PANYLRIRDG NIPVSFIQKY LMRKLDLKSE TEVEIRCMGE
301: PVIPTLQLHS LVELWLQTTT SKHERVTASI GSSAKEFVMV LVYARKLPEC NN
Best Arabidopsis Sequence Match ( AT2G30580.2 )
(BLAST)
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.