Factsheet for Bra004582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79976	Canola	nucleus	99.72	99.72
CDY23889	Canola	nucleus	96.63	96.9
Bra016980.1-P	Field mustard	nucleus	87.64	91.23
AT2G40620.1	Thale cress	nucleus	86.24	83.65
Bra000195.1-P	Field mustard	nucleus	67.42	71.86
PGSC0003DMT400042946	Potato	plastid	56.46	62.04
VIT_13s0067g02900.t01	Wine grape	nucleus	58.99	58.5
Solyc06g049040.2.1	Tomato	nucleus	54.21	58.31
PGSC0003DMT400070968	Potato	nucleus	56.46	57.59
Solyc06g048630.2.1	Tomato	nucleus	56.18	57.31
Bra030663.1-P	Field mustard	nucleus	45.79	50.94
Bra031541.1-P	Field mustard	nucleus	45.51	50.0
KRH53733	Soybean	nucleus	23.6	47.73
KRH64202	Soybean	nucleus	39.33	47.3
Bra034916.1-P	Field mustard	nucleus, plastid	26.4	35.74
Bra021735.1-P	Field mustard	nucleus	33.43	35.1
Bra030637.1-P	Field mustard	nucleus	36.8	34.38
Bra015471.1-P	Field mustard	nucleus	37.36	33.93
Bra018250.1-P	Field mustard	nucleus	35.11	33.42
Bra032191.1-P	Field mustard	nucleus	28.37	30.61
Bra035464.1-P	Field mustard	nucleus	13.76	27.84
Bra010722.1-P	Field mustard	nucleus	32.87	26.29
Bra033582.1-P	Field mustard	nucleus	32.58	26.01
Bra031172.1-P	Field mustard	nucleus	24.72	23.4
Bra030314.1-P	Field mustard	plastid	30.06	23.26
Bra004689.1-P	Field mustard	nucleus, plastid	17.7	20.59
Bra003320.1-P	Field mustard	nucleus	17.42	20.39
Bra007380.1-P	Field mustard	nucleus	17.7	19.81
Bra034913.1-P	Field mustard	nucleus	11.8	18.92
Bra031173.1-P	Field mustard	plastid	18.82	17.31
Bra000256.1-P	Field mustard	nucleus, plastid	17.42	17.13
Bra027885.1-P	Field mustard	nucleus	17.7	16.89
Bra009426.1-P	Field mustard	mitochondrion, nucleus	11.8	13.68

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra004582	EnsemblPlants:Bra004582.1	EnsemblPlants:Bra004582.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043621	GO:GO:0048471	InterPro:IPR004827	UniProt:M4CK48	PFAM:PF00170	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF103	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000254758B	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

AT2G40620 (E=2e-139) | bZIP transcription factor family protein

Coordinates

chrA05:-:885979..888000

Molecular Weight (calculated)

39661.8 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.924

Length

356 amino acids

Sequence
(BLAST)

001: MDDSSNAKSN QCPPPLSNST PTPFRGPYHR RAHSEVQFRL PEDLDLSEPF GGFDDLGSED DIFCTYMDIE KLGGSGSDSA APKSDNPLFA GEEGGSSSSR
101: PRHRHSLSVD GGSSSLESIE AKKAMAPDKL AELWVVDPKR AKRIIANRQS AARSKERKAR YIMELERKVQ TLQTEATTLS AQLSLFQRDT TGLSSENTEL
201: KLRLQVMEQQ AKLRDALNDQ LKKEVERLKF ATGEVSHADA YNLGMAHMQY SQQQQQPPQQ QSFFQHHHHQ QQQTDAQNLQ QMTHQFHLFQ PNNNNNNQNL
301: NIMHQATSNA SGQSHSFAEA MNEDPLGRLQ GLDISSCGRG SNFGRSDTVS ESSSTM

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.