Factsheet for Bra030663.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15590	Canola	nucleus	99.69	99.38
Bra031541.1-P	Field mustard	nucleus	90.0	88.89
CDY35020	Canola	nucleus	46.56	84.66
AT1G06850.1	Thale cress	nucleus	86.25	81.9
VIT_06s0004g08070.t01	Wine grape	plastid	57.19	53.51
KRH17183	Soybean	plastid	59.06	52.21
KRH72827	Soybean	plastid	58.75	51.65
KRH30482	Soybean	nucleus	57.5	47.79
KRG98137	Soybean	nucleus	56.56	47.63
Bra016980.1-P	Field mustard	nucleus	50.0	46.78
Bra004582.1-P	Field mustard	nucleus	50.94	45.79
Bra000195.1-P	Field mustard	nucleus	42.5	40.72
Bra034916.1-P	Field mustard	nucleus, plastid	29.06	35.36
Bra018250.1-P	Field mustard	nucleus	40.0	34.22
Bra030637.1-P	Field mustard	nucleus	39.69	33.33
Bra021735.1-P	Field mustard	nucleus	35.0	33.04
Bra015471.1-P	Field mustard	nucleus	39.38	32.14
Bra032191.1-P	Field mustard	nucleus	31.88	30.91
Bra035464.1-P	Field mustard	nucleus	14.69	26.7
Bra033582.1-P	Field mustard	nucleus	33.44	23.99
Bra031172.1-P	Field mustard	nucleus	27.81	23.67
Bra010722.1-P	Field mustard	nucleus	32.5	23.37
Bra030314.1-P	Field mustard	plastid	33.12	23.04
Bra004689.1-P	Field mustard	nucleus, plastid	20.94	21.9
Bra003320.1-P	Field mustard	nucleus	19.69	20.72
Bra007380.1-P	Field mustard	nucleus	19.69	19.81
Bra034913.1-P	Field mustard	nucleus	13.12	18.92
Bra000256.1-P	Field mustard	nucleus, plastid	20.94	18.51
Bra027885.1-P	Field mustard	nucleus	19.06	16.35
Bra031173.1-P	Field mustard	plastid	18.75	15.5
Bra009426.1-P	Field mustard	mitochondrion, nucleus	12.81	13.36

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra030663	EnsemblPlants:Bra030663.1	EnsemblPlants:Bra030663.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4EPE3	PFAM:PF07716	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF82	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002546F50	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

AT1G06850 (E=4e-097) AtbZIP52 | AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52); DNA binding / transcription factor

Coordinates

chrA08:-:20906413..20907807

Molecular Weight (calculated)

35364.1 Da

IEP (calculated)

5.232

GRAVY (calculated)

-0.827

Length

320 amino acids

Sequence
(BLAST)

001: MDKPDPPPNP NADPVPSSFH RRTRSDDMSM FMFTDPLSSA APPSSDDLPS DDDLFSSFID VDSLSSNPNP PISFPDPSSA AVPPPNSSSR PRHRHSNSVD
101: AGCAMYAGDE IMDAKKAMPP EKLSELWSVD PKRAKRILAN RQSAARSKER KARYIQELER RVQSLQTEAT TLSAQLTLFQ RDTNGLANEN TELKMRLQAM
201: EQQAHLRNAL NEALRKEVER MKMETGEISG NSDSFDMGMQ QVQYSPSTFM AIPPYHHGSI NNGQDMQQMR GFNQMSNSQS VSEFLQNGRL QGLEISSNNS
301: SSLVKSEGPS LSGSESSSAY

Best Arabidopsis Sequence Match ( AT1G06850.1 )
(BLAST)

001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY

Arabidopsis Description

AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.