Factsheet for Bra034913.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48939	Canola	nucleus	99.55	71.52
CDX80717	Canola	nucleus, plastid	91.44	63.44
AT1G35490.1	Thale cress	nucleus	73.87	54.67
Bra035464.1-P	Field mustard	nucleus	25.23	31.82
VIT_18s0001g03010.t01	Wine grape	nucleus	32.43	26.47
Solyc11g020950.1.1	Tomato	nucleus	32.88	22.39
Zm00001d035240_P001	Maize	nucleus	22.52	22.12
PGSC0003DMT400024003	Potato	nucleus	33.33	21.33
Os11t0218000-01	Rice	nucleus	31.08	18.96
GSMUA_Achr8P29390_001	Banana	nucleus	31.08	18.85
KXG28232	Sorghum	mitochondrion	29.73	18.44
Zm00001d041831_P001	Maize	mitochondrion	28.83	18.39
Zm00001d049135_P001	Maize	mitochondrion	28.83	18.34
GSMUA_Achr9P00300_001	Banana	nucleus	30.18	17.82
TraesCS4A01G204300.1	Wheat	nucleus	27.48	17.63
TraesCS4B01G108000.1	Wheat	nucleus	27.48	17.63
TraesCS4D01G105100.1	Wheat	mitochondrion	27.48	17.63
KXG23197	Sorghum	mitochondrion	28.38	17.45
Bra027885.1-P	Field mustard	nucleus	28.83	17.16
Os12t0194600-01	Rice	nucleus	27.93	16.8
HORVU5Hr1G031130.2	Barley	mitochondrion	26.58	16.39
GSMUA_Achr3P02820_001	Banana	golgi	28.83	15.96
Bra003320.1-P	Field mustard	nucleus	21.62	15.79
Bra004689.1-P	Field mustard	nucleus, plastid	21.17	15.36
Bra007380.1-P	Field mustard	nucleus	21.62	15.09
HORVU4Hr1G016340.4	Barley	nucleus, plastid	27.93	15.05
Bra034916.1-P	Field mustard	nucleus, plastid	15.77	13.31
Bra016980.1-P	Field mustard	nucleus	20.27	13.16
Bra030663.1-P	Field mustard	nucleus	18.92	13.12
Bra031541.1-P	Field mustard	nucleus	18.47	12.65
Bra000256.1-P	Field mustard	nucleus, plastid	20.27	12.43
Bra009426.1-P	Field mustard	mitochondrion, nucleus	17.12	12.38
Bra021735.1-P	Field mustard	nucleus	18.02	11.8
Bra004582.1-P	Field mustard	nucleus	18.92	11.8
Bra032191.1-P	Field mustard	nucleus	17.12	11.52
Bra018250.1-P	Field mustard	nucleus	18.92	11.23
Bra030637.1-P	Field mustard	nucleus	18.92	11.02
Bra000195.1-P	Field mustard	nucleus	16.22	10.78
Bra015471.1-P	Field mustard	nucleus	18.92	10.71
Bra031172.1-P	Field mustard	nucleus	17.57	10.37
Bra030314.1-P	Field mustard	plastid	18.47	8.91
Bra033582.1-P	Field mustard	nucleus	16.67	8.3
Bra031173.1-P	Field mustard	plastid	14.41	8.27
Bra010722.1-P	Field mustard	nucleus	16.22	8.09

Protein Annotations

EnsemblPlants:Bra034913.1	EnsemblPlants:Bra034913.1-P	EnsemblPlantsGene:Bra034913	PANTHER:PTHR13301	PANTHER:PTHR13301:SF25	SEG:seg
UniParc:UPI000254726B	UniProt:M4F1G7	MapMan:35.2	:	:	:

Description

AT1G35490 (E=2e-076) | bZIP family transcription factor

Coordinates

chrA08:-:5331819..5332902

Molecular Weight (calculated)

25526.0 Da

IEP (calculated)

9.793

GRAVY (calculated)

-1.019

Length

222 amino acids

Sequence
(BLAST)

001: MPFREDDLLN SHFSGPSGIV QNINRHDDLW QPNSYDNHGK LGWEFSNKNG TNVQTHVSWG AVNKAGTSAS KSAETQVSKM KEGSFTKPDG PGSKTDSKRI
101: KHQNAHRARL RRLEYISDLE RTIQVLQAQG CEMSSAIHYL DQQLVMLSME NRALKQRLDS LAEIQKLKHV EQQFLEREIG NLKFRKHQQQ PQQNQKQMQQ
201: NRYDYRPPAT QEPESQFAAL AI

Best Arabidopsis Sequence Match ( AT1G35490.1 )
(BLAST)

001: MENLRRLSNP GNFGFIGRSQ SRVPQKNMEN NISPPNNMHH HSASLDDLFT EDQPAWLDEL LSEPASPKIN KGHRRSASDT AAYLNSALMP SKENHVAGSS
101: WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV
201: LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI

Arabidopsis Description

BZIP family transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.