Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G204300.1 | Wheat | nucleus | 98.84 | 98.84 |
| TraesCS4D01G105100.1 | Wheat | mitochondrion | 97.98 | 97.98 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 97.98 | 82.28 |
| Os11t0218000-01 | Rice | nucleus | 83.24 | 79.12 |
| Zm00001d049135_P001 | Maize | mitochondrion | 78.61 | 77.94 |
| KXG28232 | Sorghum | mitochondrion | 80.64 | 77.93 |
| Bra035464.1-P | Field mustard | nucleus | 26.88 | 52.84 |
| VIT_12s0035g00620.t01 | Wine grape | nucleus | 52.02 | 48.13 |
| KRH43037 | Soybean | nucleus | 50.58 | 46.54 |
| GSMUA_Achr8P29390_001 | Banana | nucleus | 48.84 | 46.17 |
| KRH59143 | Soybean | nucleus | 50.0 | 46.13 |
| CDY23807 | Canola | nucleus | 43.93 | 45.24 |
| PGSC0003DMT400064169 | Potato | nucleus | 47.4 | 44.93 |
| CDY46864 | Canola | nucleus | 43.06 | 44.61 |
| CDY39913 | Canola | nucleus | 44.8 | 41.78 |
| Bra027885.1-P | Field mustard | nucleus | 44.8 | 41.55 |
| CDY29162 | Canola | nucleus | 44.8 | 41.44 |
| AT1G58110.2 | Thale cress | nucleus | 44.51 | 41.18 |
| Solyc11g020950.1.1 | Tomato | nucleus | 37.86 | 40.18 |
| VIT_18s0001g03010.t01 | Wine grape | nucleus | 30.35 | 38.6 |
| PGSC0003DMT400024003 | Potato | nucleus | 38.44 | 38.33 |
| GSMUA_Achr9P00300_001 | Banana | nucleus | 41.33 | 38.03 |
| Solyc10g044830.1.1 | Tomato | nucleus | 26.88 | 37.65 |
| AT4G06598.1 | Thale cress | nucleus | 27.75 | 36.23 |
| GSMUA_Achr3P02820_001 | Banana | golgi | 41.04 | 35.41 |
| AT1G35490.1 | Thale cress | nucleus | 24.57 | 28.33 |
| CDY48939 | Canola | nucleus | 24.86 | 27.83 |
| TraesCS5B01G142200.1 | Wheat | nucleus | 19.08 | 27.62 |
| Bra034913.1-P | Field mustard | nucleus | 17.63 | 27.48 |
| TraesCS3B01G328400.1 | Wheat | nucleus | 20.81 | 26.87 |
| TraesCS3B01G167500.1 | Wheat | nucleus | 22.54 | 26.71 |
| TraesCS2B01G165700.1 | Wheat | nucleus | 23.7 | 26.71 |
| CDX80717 | Canola | nucleus, plastid | 23.99 | 25.94 |
| TraesCS6B01G222800.1 | Wheat | nucleus | 19.65 | 21.05 |
| TraesCS5B01G124200.1 | Wheat | nucleus | 15.32 | 18.93 |
| TraesCS1B01G193800.1 | Wheat | nucleus | 20.23 | 18.04 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 18.21 | 17.03 |
| TraesCS4B01G113400.1 | Wheat | nucleus | 16.18 | 17.02 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 18.21 | 16.71 |
| TraesCS4B01G169600.1 | Wheat | nucleus | 17.05 | 16.57 |
| TraesCS2B01G122700.1 | Wheat | nucleus | 16.76 | 15.68 |
| TraesCS4B01G320400.1 | Wheat | nucleus | 17.34 | 15.0 |
| TraesCS5B01G308800.1 | Wheat | plastid | 17.05 | 12.63 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G108000.1 | EnsemblPlantsGene:TraesCS4B01G108000 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR13301 | PANTHER:PTHR13301:SF133 | SEG:seg | SMART:SM00338 |
| SUPFAM:SSF57959 | TIGR:cd14703 | MapMan:15.5.4.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:118290384..118293889
Molecular Weight (calculated)
38405.1 Da
IEP (calculated)
9.144
GRAVY (calculated)
-0.906
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMANAKLQK QALLPPRSPF PTAASPSPYA DHGPIARPQG ATHHRFGHGH GHGHHQRTSS ESIIEEQPSW LDDLLDEPET PVRRAGHRRS SSDSFALFDG
101: SAASGAFANG FEEMGGGGQA APWGGVQEYY AKPSSYGRPQ GRPWEQGMPN LAGYRPGPPV LVREKLGGHH GPLSASRDHE HAMDKRALDE LGAERKEGVL
201: PKYAQSEADT KRAKQQYAQR SRVRKLQYIA ELEGKVQSLQ SEGIEVSAEM EFLTQQNIML DLENKALKQR LESIAQEQVI KRVQQEMFER EIGRLRSLYQ
301: QQQQPPQPPT LARSNSRDLD SQFASMSLKH KDPNSGRDAV SGPLRT
101: SAASGAFANG FEEMGGGGQA APWGGVQEYY AKPSSYGRPQ GRPWEQGMPN LAGYRPGPPV LVREKLGGHH GPLSASRDHE HAMDKRALDE LGAERKEGVL
201: PKYAQSEADT KRAKQQYAQR SRVRKLQYIA ELEGKVQSLQ SEGIEVSAEM EFLTQQNIML DLENKALKQR LESIAQEQVI KRVQQEMFER EIGRLRSLYQ
301: QQQQPPQPPT LARSNSRDLD SQFASMSLKH KDPNSGRDAV SGPLRT
001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.