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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034913.1-P Field mustard nucleus 71.52 99.55
CDX80717 Canola nucleus, plastid 93.2 90.0
AT1G35490.1 Thale cress nucleus 74.43 76.67
PGSC0003DMT400024003 Potato nucleus 36.57 32.56
Solyc11g020950.1.1 Tomato nucleus 33.33 31.6
VIT_18s0001g03010.t01 Wine grape nucleus 26.54 30.15
CDY23807 Canola nucleus 30.42 27.98
CDY46864 Canola nucleus 30.1 27.84
CDY13829 Canola cytosol 0.97 27.27
GSMUA_Achr8P29390_001 Banana nucleus 31.39 26.5
Zm00001d041831_P001 Maize mitochondrion 29.77 26.44
Os11t0218000-01 Rice nucleus 30.74 26.1
CDY39913 Canola nucleus 31.07 25.88
CDY29162 Canola nucleus 31.07 25.67
Zm00001d049135_P001 Maize mitochondrion 28.8 25.5
KXG23197 Sorghum mitochondrion 29.77 25.48
KXG28232 Sorghum mitochondrion 29.45 25.42
TraesCS4B01G108000.1 Wheat nucleus 27.83 24.86
TraesCS4A01G204300.1 Wheat nucleus 27.83 24.86
TraesCS4D01G105100.1 Wheat mitochondrion 27.51 24.57
GSMUA_Achr9P00300_001 Banana nucleus 29.77 24.47
Os12t0194600-01 Rice nucleus 29.13 24.39
HORVU5Hr1G031130.2 Barley mitochondrion 28.16 24.17
GSMUA_Achr3P02820_001 Banana golgi 30.74 23.69
CDY56238 Canola extracellular 9.71 22.39
Zm00001d035240_P001 Maize nucleus 16.18 22.12
CDY35379 Canola nucleus, plastid 19.09 22.01
CDY64520 Canola nucleus, plastid 19.42 21.98
CDX71000 Canola nucleus, plastid 19.74 21.86
CDX79872 Canola nucleus, plastid 19.74 21.79
CDY22561 Canola nucleus, plastid 18.77 21.64
CDY06053 Canola nucleus 19.74 21.48
CDX71974 Canola nucleus, plastid 18.45 21.35
HORVU4Hr1G016340.4 Barley nucleus, plastid 28.16 21.12
CDX70198 Canola mitochondrion, nucleus 20.06 20.2
CDX98266 Canola nucleus, plastid 19.42 20.13
CDY44883 Canola mitochondrion, nucleus 19.09 19.28
CDY19094 Canola nucleus 16.5 16.04
CDY35020 Canola nucleus 9.06 15.91
CDY13830 Canola nucleus, plastid 14.89 14.98
CDY15381 Canola nucleus 17.8 14.86
CDY06974 Canola nucleus 16.83 14.77
CDY06231 Canola nucleus 15.53 14.77
CDY15560 Canola nucleus 18.12 14.7
CDY15590 Canola nucleus 15.21 14.64
CDY09952 Canola nucleus 15.53 14.63
CDX80722 Canola nucleus 15.21 14.6
CDX93167 Canola nucleus 16.18 14.58
CDY10799 Canola nucleus 17.48 14.56
CDY30752 Canola nucleus 15.53 14.55
CDY56611 Canola nucleus 17.15 14.4
CDX86537 Canola nucleus 18.12 14.25
CDY71925 Canola nucleus 11.65 14.17
CDX86512 Canola nucleus 14.56 14.15
CDY48943 Canola nucleus 11.0 14.11
CDY47713 Canola nucleus 17.8 14.03
CDY10170 Canola nucleus 17.8 13.99
CDY23889 Canola nucleus 15.86 13.8
CDX82008 Canola nucleus 16.5 13.71
CDX79976 Canola nucleus 15.53 13.48
CDY24896 Canola nucleus 14.24 12.98
CDY15909 Canola plastid 18.45 12.84
CDY07597 Canola nucleus 13.59 12.57
CDX99610 Canola nucleus 17.8 12.44
CDX82009 Canola plastid 14.24 11.49
CDY70502 Canola nucleus 14.24 11.4
CDY13828 Canola plastid 14.24 11.37
CDY12108 Canola nucleus 15.53 11.27
CDX72732 Canola nucleus 15.86 11.11
CDY22407 Canola nucleus 15.86 11.01
CDX90298 Canola nucleus 15.21 10.73
Protein Annotations
EnsemblPlants:CDY48939EnsemblPlantsGene:GSBRNA2T00092029001PANTHER:PTHR13301PANTHER:PTHR13301:SF25ProteinID:CDY48939ProteinID:CDY48939.1
SEG:segUniParc:UPI0004EE1130UniProt:A0A078IHQ7MapMan:35.2::
Description
BnaA08g04750DBnaA08g04750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHQ7]
Coordinates
chrLK032802:+:3326..5226
Molecular Weight (calculated)
34890.6 Da
IEP (calculated)
9.518
GRAVY (calculated)
-0.965
Length
309 amino acids
Sequence
(BLAST)
001: MEGSGSLSNA GNFGSIGRQS QASQKNRENS ISPPSNMHHH SASLNNLLID EQPAWLDDLL SEPASPKINK GHRRSASDTS AYLNSAFMPF REDDLLNSHF
101: SGPSGIVQNI NRHDDLWQPN SYDNHGKLGW EFSNKNGTNF QTHVSWGAVN KAGTSASKSA ETQVSKMKEG SFTKPDGPGS KTDSKRIKHQ NAHRARLRRL
201: EYISDLERTI QVLQAQGCEM SSAIHYLDQQ LVMLSMENRA LKQRLDSLAE IQKLKHVEQQ FLEREIGNLK FRKHQQQPQQ NQKQMQQNRY DYRPPATQEP
301: ESQFAALAI
Best Arabidopsis Sequence Match ( AT1G35490.1 )
(BLAST)
001: MENLRRLSNP GNFGFIGRSQ SRVPQKNMEN NISPPNNMHH HSASLDDLFT EDQPAWLDEL LSEPASPKIN KGHRRSASDT AAYLNSALMP SKENHVAGSS
101: WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV
201: LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI
Arabidopsis Description
BZIP family transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUZ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.