Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016980.1-P | Field mustard | nucleus | 95.63 | 95.91 |
| CDY06974 | Canola | nucleus | 98.25 | 95.74 |
| CDX79976 | Canola | nucleus | 90.67 | 87.36 |
| CDY23889 | Canola | nucleus | 90.09 | 87.04 |
| AT2G40620.1 | Thale cress | nucleus | 89.8 | 83.92 |
| CDY24896 | Canola | nucleus | 73.76 | 74.63 |
| CDY07597 | Canola | nucleus | 69.39 | 71.26 |
| PGSC0003DMT400042946 | Potato | plastid | 58.31 | 61.73 |
| VIT_13s0067g02900.t01 | Wine grape | nucleus | 61.22 | 58.5 |
| Solyc06g049040.2.1 | Tomato | nucleus | 55.69 | 57.7 |
| PGSC0003DMT400070968 | Potato | nucleus | 58.02 | 57.02 |
| Solyc06g048630.2.1 | Tomato | nucleus | 57.73 | 56.73 |
| CDY35020 | Canola | nucleus | 28.86 | 56.25 |
| CDX86512 | Canola | nucleus | 47.52 | 51.26 |
| CDY15590 | Canola | nucleus | 47.52 | 50.78 |
| CDY06231 | Canola | nucleus | 47.23 | 49.85 |
| CDY09952 | Canola | nucleus | 47.23 | 49.39 |
| KRH53733 | Soybean | nucleus | 24.49 | 47.73 |
| KRH64202 | Soybean | nucleus | 39.94 | 46.28 |
| CDY48943 | Canola | nucleus | 27.11 | 38.59 |
| CDY19094 | Canola | nucleus | 34.4 | 37.11 |
| CDY15381 | Canola | nucleus | 37.03 | 34.32 |
| CDY10799 | Canola | nucleus | 37.03 | 34.23 |
| CDY10170 | Canola | nucleus | 39.07 | 34.1 |
| CDY47713 | Canola | nucleus | 38.78 | 33.93 |
| CDY15560 | Canola | nucleus | 37.61 | 33.86 |
| CDY56611 | Canola | nucleus | 36.15 | 33.7 |
| CDX86537 | Canola | nucleus | 37.03 | 32.32 |
| CDX80722 | Canola | nucleus | 30.03 | 31.99 |
| CDY30752 | Canola | nucleus | 29.74 | 30.91 |
| CDY13830 | Canola | nucleus, plastid | 25.07 | 28.01 |
| CDY71925 | Canola | nucleus | 20.41 | 27.56 |
| CDY12108 | Canola | nucleus | 34.11 | 27.46 |
| CDX72732 | Canola | nucleus | 35.28 | 27.44 |
| CDX90298 | Canola | nucleus | 34.4 | 26.94 |
| CDY22407 | Canola | nucleus | 34.69 | 26.74 |
| CDY15909 | Canola | plastid | 32.07 | 24.77 |
| CDX99610 | Canola | nucleus | 31.78 | 24.66 |
| CDX82008 | Canola | nucleus | 25.95 | 23.92 |
| CDY22561 | Canola | nucleus, plastid | 17.49 | 22.39 |
| CDY64520 | Canola | nucleus, plastid | 17.49 | 21.98 |
| CDX71000 | Canola | nucleus, plastid | 17.78 | 21.86 |
| CDX79872 | Canola | nucleus, plastid | 17.78 | 21.79 |
| CDX71974 | Canola | nucleus, plastid | 16.91 | 21.72 |
| CDY35379 | Canola | nucleus, plastid | 16.91 | 21.64 |
| CDY56238 | Canola | extracellular | 8.45 | 21.64 |
| CDY06053 | Canola | nucleus | 17.78 | 21.48 |
| CDX98266 | Canola | nucleus, plastid | 17.49 | 20.13 |
| CDX82009 | Canola | plastid | 21.87 | 19.58 |
| CDY70502 | Canola | nucleus | 21.87 | 19.43 |
| CDY13828 | Canola | plastid | 20.12 | 17.83 |
| CDY46864 | Canola | nucleus | 17.2 | 17.66 |
| CDY23807 | Canola | nucleus | 17.2 | 17.56 |
| CDY39913 | Canola | nucleus | 18.37 | 16.98 |
| CDY29162 | Canola | nucleus | 18.37 | 16.84 |
| CDY48939 | Canola | nucleus | 14.58 | 16.18 |
| CDX80717 | Canola | nucleus, plastid | 14.87 | 15.94 |
| CDX70198 | Canola | mitochondrion, nucleus | 11.95 | 13.36 |
| CDY44883 | Canola | mitochondrion, nucleus | 11.66 | 13.07 |
| CDY13829 | Canola | cytosol | 0.29 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078DW65 | EnsemblPlants:CDX93167 | ProteinID:CDX93167 | ProteinID:CDX93167.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00155098001 | InterPro:IPR004827 | PFAM:PF00170 |
| PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF103 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE0AE9 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC04g47290D
Coordinates
chrLK031875:+:21608..24030
Molecular Weight (calculated)
38275.3 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.889
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDPSNTTKS NQCPPPLSTA PPTSTPFRGP YHRRAHSEVQ FRLPEDLDLS EPFGGFEDLG SEDDLFCSYM DIEKLGSGSD SAGPSAPRSD NPFSEAGDSR
101: PRHRHSLSVD GGSSTLESIE AKKAMAPDKL AELWVVDPKR AKRIMANRQS AARSKERKAR YIMELERKVQ TLQTEATTLS AQLSLFQRDT TGLSSENTEL
201: KLRLQVMEQQ AKLRDALNDQ LKKEVERLKF ATGEVSHADA YNLQMSHMQY SQQQSFFQQQ QADAQNLQQM THQFHLFQPN NNQNQNPQLM HHATSSASGQ
301: SHSFAEAMHE DHLGRLQGLD ISSCGRGSNF GRSDTVSESS STM
101: PRHRHSLSVD GGSSTLESIE AKKAMAPDKL AELWVVDPKR AKRIMANRQS AARSKERKAR YIMELERKVQ TLQTEATTLS AQLSLFQRDT TGLSSENTEL
201: KLRLQVMEQQ AKLRDALNDQ LKKEVERLKF ATGEVSHADA YNLQMSHMQY SQQQSFFQQQ QADAQNLQQM THQFHLFQPN NNQNQNPQLM HHATSSASGQ
301: SHSFAEAMHE DHLGRLQGLD ISSCGRGSNF GRSDTVSESS STM
001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM
Arabidopsis Description
BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.