Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031541.1-P | Field mustard | nucleus | 98.77 | 99.07 |
| CDY09952 | Canola | nucleus | 97.85 | 96.95 |
| CDX86512 | Canola | nucleus | 88.31 | 90.25 |
| CDY15590 | Canola | nucleus | 88.31 | 89.41 |
| CDY35020 | Canola | nucleus | 44.31 | 81.82 |
| AT1G06850.1 | Thale cress | nucleus | 84.62 | 81.6 |
| VIT_06s0004g08070.t01 | Wine grape | plastid | 56.92 | 54.09 |
| KRH17183 | Soybean | plastid | 57.85 | 51.93 |
| KRH72827 | Soybean | plastid | 58.15 | 51.92 |
| KRG98137 | Soybean | nucleus | 56.62 | 48.42 |
| KRH30482 | Soybean | nucleus | 56.92 | 48.05 |
| CDX93167 | Canola | nucleus | 49.85 | 47.23 |
| CDY06974 | Canola | nucleus | 50.15 | 46.31 |
| CDY23889 | Canola | nucleus | 50.46 | 46.2 |
| CDX79976 | Canola | nucleus | 49.85 | 45.51 |
| CDY24896 | Canola | nucleus | 44.92 | 43.07 |
| CDY07597 | Canola | nucleus | 40.62 | 39.52 |
| CDY48943 | Canola | nucleus | 28.31 | 38.17 |
| CDY19094 | Canola | nucleus | 33.54 | 34.28 |
| CDY56611 | Canola | nucleus | 38.77 | 34.24 |
| CDY10799 | Canola | nucleus | 38.77 | 33.96 |
| CDY15381 | Canola | nucleus | 37.23 | 32.7 |
| CDY15560 | Canola | nucleus | 38.15 | 32.55 |
| CDX80722 | Canola | nucleus | 32.0 | 32.3 |
| CDY10170 | Canola | nucleus | 38.77 | 32.06 |
| CDY30752 | Canola | nucleus | 32.31 | 31.82 |
| CDY47713 | Canola | nucleus | 37.85 | 31.38 |
| CDX86537 | Canola | nucleus | 37.85 | 31.3 |
| CDY13830 | Canola | nucleus, plastid | 26.77 | 28.34 |
| CDY71925 | Canola | nucleus | 21.85 | 27.95 |
| CDY22561 | Canola | nucleus, plastid | 21.23 | 25.75 |
| CDX71974 | Canola | nucleus, plastid | 20.31 | 24.72 |
| CDY12108 | Canola | nucleus | 32.31 | 24.65 |
| CDY35379 | Canola | nucleus, plastid | 20.31 | 24.63 |
| CDX72732 | Canola | nucleus | 33.23 | 24.49 |
| CDX82008 | Canola | nucleus | 27.69 | 24.19 |
| CDY22407 | Canola | nucleus | 32.92 | 24.04 |
| CDX99610 | Canola | nucleus | 32.62 | 23.98 |
| CDY56238 | Canola | extracellular | 9.85 | 23.88 |
| CDY15909 | Canola | plastid | 32.62 | 23.87 |
| CDX71000 | Canola | nucleus, plastid | 20.31 | 23.66 |
| CDX79872 | Canola | nucleus, plastid | 20.31 | 23.57 |
| CDY64520 | Canola | nucleus, plastid | 19.69 | 23.44 |
| CDX90298 | Canola | nucleus | 31.38 | 23.29 |
| CDY06053 | Canola | nucleus | 20.31 | 23.24 |
| CDX98266 | Canola | nucleus, plastid | 20.31 | 22.15 |
| CDY46864 | Canola | nucleus | 17.54 | 17.07 |
| CDY23807 | Canola | nucleus | 17.54 | 16.96 |
| CDY39913 | Canola | nucleus | 19.08 | 16.71 |
| CDY29162 | Canola | nucleus | 19.08 | 16.58 |
| CDX82009 | Canola | plastid | 19.38 | 16.45 |
| CDY70502 | Canola | nucleus | 19.38 | 16.32 |
| CDY48939 | Canola | nucleus | 14.77 | 15.53 |
| CDY13828 | Canola | plastid | 18.46 | 15.5 |
| CDX80717 | Canola | nucleus, plastid | 14.77 | 15.0 |
| CDY44883 | Canola | mitochondrion, nucleus | 12.62 | 13.4 |
| CDX70198 | Canola | mitochondrion, nucleus | 12.62 | 13.36 |
| CDY13829 | Canola | cytosol | 0.31 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078EYK0 | EnsemblPlants:CDY06231 | ProteinID:CDY06231 | ProteinID:CDY06231.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00122144001 | InterPro:IPR004827 | PFAM:PF00170 |
| PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF82 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF44C8 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaA09g49720D
Coordinates
chrLK031968:+:381957..385276
Molecular Weight (calculated)
36004.9 Da
IEP (calculated)
6.001
GRAVY (calculated)
-0.808
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPDPQPPN AADPIPSSFH RRSRSDDMSM FMFMDPLSSS GPPPSSDDLP SDDDLFSSFI DVDSLSSNPH PTTIAFPNHH AAANSVPSSS SRPRHRHSNS
101: VDAGCAMYAN EIMDAKKAMP PEKLSELWNV DPKRAKRILA NRQSAARSKE RKARYIQELE RKVQSLQTEA TTLSAQLTLF QRDTNGLANE NTELKLRLQA
201: MEQQAHLRNA LNEALRKELE RMKIETGEIS GNSDSFDMGM QQVQYSPSTY MAIPPYHHGA INNGQDMQQM HGYNPMEAMS NSQSVSEFLQ NGRLQGLEIS
301: SNNNSSSLVK SEGPSLSASE SSSAY
101: VDAGCAMYAN EIMDAKKAMP PEKLSELWNV DPKRAKRILA NRQSAARSKE RKARYIQELE RKVQSLQTEA TTLSAQLTLF QRDTNGLANE NTELKLRLQA
201: MEQQAHLRNA LNEALRKELE RMKIETGEIS GNSDSFDMGM QQVQYSPSTY MAIPPYHHGA INNGQDMQQM HGYNPMEAMS NSQSVSEFLQ NGRLQGLEIS
301: SNNNSSSLVK SEGPSLSASE SSSAY
001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY
Arabidopsis Description
AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.