Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033582.1-P | Field mustard | nucleus | 98.88 | 98.65 |
| CDX72732 | Canola | nucleus | 84.72 | 85.49 |
| CDY12108 | Canola | nucleus | 71.69 | 74.88 |
| CDX90298 | Canola | nucleus | 72.58 | 73.74 |
| AT4G38900.1 | Thale cress | nucleus | 80.45 | 64.74 |
| VIT_18s0001g13740.t01 | Wine grape | nucleus | 17.75 | 59.85 |
| CDY15909 | Canola | plastid | 45.62 | 45.72 |
| CDX99610 | Canola | nucleus | 44.49 | 44.8 |
| CDY13830 | Canola | nucleus, plastid | 29.89 | 43.32 |
| CDY48943 | Canola | nucleus | 21.57 | 39.83 |
| CDX82008 | Canola | nucleus | 33.03 | 39.52 |
| CDY35020 | Canola | nucleus | 15.51 | 39.2 |
| KRH61066 | Soybean | nucleus, plastid | 42.92 | 37.23 |
| PGSC0003DMT400009538 | Potato | nucleus | 36.85 | 36.94 |
| Solyc04g081190.2.1 | Tomato | nucleus | 36.85 | 36.94 |
| KRH05913 | Soybean | nucleus | 43.6 | 35.08 |
| CDX93167 | Canola | nucleus | 26.74 | 34.69 |
| CDY06974 | Canola | nucleus | 26.97 | 34.09 |
| CDY19094 | Canola | nucleus | 24.27 | 33.96 |
| KRH17396 | Soybean | nucleus | 42.47 | 33.81 |
| CDX86512 | Canola | nucleus | 24.04 | 33.65 |
| CDY23889 | Canola | nucleus | 26.74 | 33.52 |
| CDY15590 | Canola | nucleus | 24.04 | 33.33 |
| CDY15560 | Canola | nucleus | 28.31 | 33.07 |
| CDY06231 | Canola | nucleus | 24.04 | 32.92 |
| CDX80722 | Canola | nucleus | 23.82 | 32.92 |
| CDX79976 | Canola | nucleus | 26.29 | 32.87 |
| CDY09952 | Canola | nucleus | 23.82 | 32.32 |
| KRH51734 | Soybean | nucleus | 28.99 | 32.17 |
| CDY30752 | Canola | nucleus | 23.6 | 31.82 |
| CDX86537 | Canola | nucleus | 27.87 | 31.55 |
| CDY10170 | Canola | nucleus | 27.64 | 31.3 |
| CDY10799 | Canola | nucleus | 26.07 | 31.27 |
| CDY15381 | Canola | nucleus | 25.84 | 31.08 |
| CDY56611 | Canola | nucleus | 25.62 | 30.98 |
| CDY47713 | Canola | nucleus | 26.97 | 30.61 |
| CDY24896 | Canola | nucleus | 22.7 | 29.79 |
| CDY71925 | Canola | nucleus | 16.18 | 28.35 |
| CDY13829 | Canola | cytosol | 0.67 | 27.27 |
| CDY07597 | Canola | nucleus | 20.22 | 26.95 |
| CDY64520 | Canola | nucleus, plastid | 14.38 | 23.44 |
| CDX71000 | Canola | nucleus, plastid | 14.61 | 23.3 |
| CDX79872 | Canola | nucleus, plastid | 14.61 | 23.21 |
| CDX71974 | Canola | nucleus, plastid | 13.71 | 22.85 |
| CDY06053 | Canola | nucleus | 14.38 | 22.54 |
| CDY22561 | Canola | nucleus, plastid | 13.48 | 22.39 |
| CDX82009 | Canola | plastid | 19.1 | 22.19 |
| CDY70502 | Canola | nucleus | 19.1 | 22.02 |
| CDX98266 | Canola | nucleus, plastid | 14.61 | 21.81 |
| CDY13828 | Canola | plastid | 18.88 | 21.71 |
| CDY35379 | Canola | nucleus, plastid | 13.03 | 21.64 |
| CDY56238 | Canola | extracellular | 6.07 | 20.15 |
| CDY46864 | Canola | nucleus | 13.71 | 18.26 |
| CDY23807 | Canola | nucleus | 13.71 | 18.15 |
| CDY39913 | Canola | nucleus | 14.83 | 17.79 |
| CDY29162 | Canola | nucleus | 14.61 | 17.38 |
| CDY48939 | Canola | nucleus | 11.01 | 15.86 |
| CDY44883 | Canola | mitochondrion, nucleus | 10.79 | 15.69 |
| CDX70198 | Canola | mitochondrion, nucleus | 10.79 | 15.64 |
| CDX80717 | Canola | nucleus, plastid | 10.79 | 15.0 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078GBF3 | UniProt:A0A078GBF3 | EnsemblPlants:CDY22407 | ProteinID:CDY22407 |
| ProteinID:CDY22407.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00018899001 | InterPro:IPR004827 |
| PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF76 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EDCC48 | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaA06g37290DBnaA06g37290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBF3]
Coordinates
chrLK032130:+:588835..590980
Molecular Weight (calculated)
49210.3 Da
IEP (calculated)
7.787
GRAVY (calculated)
-0.831
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDTDTDMIH RHHSSIPKQK HQQLELNPNN LIRSSASQFS SESGISKRVG VPPTSPYSQI QILNPGATTT TSHSRSMSQP CSFFSLDSLP PLSPSPFLDD
101: RLNTNPSSLL PPFTSSSRAD SLPPRKSHRR SNSDIPTGLT SNPFVKKEDM DDLFSAYMNL DNIDALNSSE NLSRDDMESS RASGTKTNSD TEGETSSVNG
201: DHNNNNLKRR AGGGDIAPSS RHYRSVSVDS CFIDKLSFPD DSLKPPPSPG TTRKVSPTNS VDAAPAFSIE FNNGEFTAAE MKKIMANDKL ADMAISDPKR
301: VKRILANRQS AARSKERKMR YIVELEHKVQ TLQTEATTLS AQLTLLQRDM MGLTNQNNEL KFRLQSMEQQ ARLRDALNEA LNGEVQRLKL AIGESSHSNE
401: ADRSKMQSLN AEMFQQLNIS QLRQQQPQSQ SLQNGTVSTK PESNE
101: RLNTNPSSLL PPFTSSSRAD SLPPRKSHRR SNSDIPTGLT SNPFVKKEDM DDLFSAYMNL DNIDALNSSE NLSRDDMESS RASGTKTNSD TEGETSSVNG
201: DHNNNNLKRR AGGGDIAPSS RHYRSVSVDS CFIDKLSFPD DSLKPPPSPG TTRKVSPTNS VDAAPAFSIE FNNGEFTAAE MKKIMANDKL ADMAISDPKR
301: VKRILANRQS AARSKERKMR YIVELEHKVQ TLQTEATTLS AQLTLLQRDM MGLTNQNNEL KFRLQSMEQQ ARLRDALNEA LNGEVQRLKL AIGESSHSNE
401: ADRSKMQSLN AEMFQQLNIS QLRQQQPQSQ SLQNGTVSTK PESNE
001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.