Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10799 | Canola | nucleus | 96.2 | 95.42 |
| Bra018250.1-P | Field mustard | nucleus | 95.92 | 94.39 |
| CDY15381 | Canola | nucleus | 80.98 | 80.54 |
| CDY19094 | Canola | nucleus | 68.75 | 79.56 |
| AT2G31370.6 | Thale cress | nucleus | 84.78 | 78.39 |
| CDY15560 | Canola | nucleus | 67.39 | 65.09 |
| CDX86537 | Canola | nucleus | 69.29 | 64.89 |
| CDY47713 | Canola | nucleus | 68.75 | 64.54 |
| CDY10170 | Canola | nucleus | 68.48 | 64.12 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 66.03 | 57.18 |
| Solyc06g053350.2.1 | Tomato | plastid | 65.76 | 55.76 |
| KRH29611 | Soybean | nucleus | 57.61 | 55.06 |
| KRH24606 | Soybean | nucleus | 58.42 | 54.16 |
| GSMUA_Achr11P... | Banana | nucleus | 54.35 | 53.48 |
| Zm00001d021189_P001 | Maize | nucleus | 53.53 | 53.24 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 54.35 | 53.05 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 54.08 | 52.93 |
| Os09t0516200-01 | Rice | nucleus | 54.35 | 52.63 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 53.8 | 52.52 |
| EER99183 | Sorghum | nucleus | 55.43 | 52.04 |
| Zm00001d006127_P003 | Maize | nucleus | 52.17 | 51.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.08 | 49.87 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 48.1 | 49.86 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 48.1 | 48.49 |
| GSMUA_Achr11P... | Banana | nucleus | 58.7 | 48.21 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 47.55 | 47.95 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 47.28 | 47.03 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 46.2 | 46.2 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 46.2 | 45.58 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 54.89 | 45.39 |
| Zm00001d031697_P001 | Maize | nucleus | 30.16 | 44.58 |
| EES14151 | Sorghum | nucleus | 45.65 | 43.98 |
| Zm00001d003180_P001 | Maize | nucleus | 44.02 | 43.9 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 45.65 | 43.52 |
| EES12438 | Sorghum | nucleus | 44.57 | 43.39 |
| Zm00001d052717_P001 | Maize | nucleus | 44.84 | 43.08 |
| CDY48943 | Canola | nucleus | 27.17 | 41.49 |
| CDY35020 | Canola | nucleus | 19.84 | 41.48 |
| CDX86512 | Canola | nucleus | 34.24 | 39.62 |
| CDY15590 | Canola | nucleus | 34.51 | 39.56 |
| CDY06231 | Canola | nucleus | 34.24 | 38.77 |
| CDY09952 | Canola | nucleus | 34.24 | 38.41 |
| CDX80722 | Canola | nucleus | 32.07 | 36.65 |
| CDX93167 | Canola | nucleus | 33.7 | 36.15 |
| CDY06974 | Canola | nucleus | 34.51 | 36.08 |
| CDY23889 | Canola | nucleus | 33.7 | 34.93 |
| CDX79976 | Canola | nucleus | 33.42 | 34.55 |
| CDY71925 | Canola | nucleus | 23.64 | 34.25 |
| CDY30752 | Canola | nucleus | 30.71 | 34.24 |
| CDY24896 | Canola | nucleus | 29.08 | 31.56 |
| CDY13830 | Canola | nucleus, plastid | 26.09 | 31.27 |
| CDY07597 | Canola | nucleus | 27.72 | 30.54 |
| CDX82008 | Canola | nucleus | 27.72 | 27.42 |
| CDY15909 | Canola | plastid | 32.88 | 27.25 |
| CDX99610 | Canola | nucleus | 31.79 | 26.47 |
| CDX72732 | Canola | nucleus | 31.52 | 26.3 |
| CDY22407 | Canola | nucleus | 30.98 | 25.62 |
| CDY56238 | Canola | extracellular | 9.24 | 25.37 |
| CDY12108 | Canola | nucleus | 29.08 | 25.12 |
| CDY64520 | Canola | nucleus, plastid | 18.48 | 24.91 |
| CDX90298 | Canola | nucleus | 29.62 | 24.89 |
| CDX71000 | Canola | nucleus, plastid | 18.75 | 24.73 |
| CDX71974 | Canola | nucleus, plastid | 17.93 | 24.72 |
| CDY06053 | Canola | nucleus | 19.02 | 24.65 |
| CDX79872 | Canola | nucleus, plastid | 18.75 | 24.64 |
| CDY22561 | Canola | nucleus, plastid | 17.93 | 24.63 |
| CDY35379 | Canola | nucleus, plastid | 17.66 | 24.25 |
| CDX98266 | Canola | nucleus, plastid | 18.48 | 22.82 |
| CDY46864 | Canola | nucleus | 17.93 | 19.76 |
| CDY23807 | Canola | nucleus | 17.93 | 19.64 |
| CDX82009 | Canola | plastid | 19.02 | 18.28 |
| CDY70502 | Canola | nucleus | 19.02 | 18.13 |
| CDY39913 | Canola | nucleus | 18.21 | 18.06 |
| CDY29162 | Canola | nucleus | 18.21 | 17.91 |
| CDY13828 | Canola | plastid | 18.48 | 17.57 |
| CDY48939 | Canola | nucleus | 14.4 | 17.15 |
| CDX80717 | Canola | nucleus, plastid | 14.4 | 16.56 |
| CDX70198 | Canola | mitochondrion, nucleus | 12.23 | 14.66 |
| CDY44883 | Canola | mitochondrion, nucleus | 11.96 | 14.38 |
| CDY13829 | Canola | cytosol | 0.27 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078IXG1 | UniProt:A0A078IXG1 | EnsemblPlants:CDY56611 | ProteinID:CDY56611 |
| ProteinID:CDY56611.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00019790001 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF80 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EC0A0A | InterPro:bZIP | SEG:seg |
Description
BnaCnng30720DBnaCnng30720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXG1]
Coordinates
chrLK033504:+:24132..25943
Molecular Weight (calculated)
41263.1 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.936
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREKSPAPS GGLPPPSPTP IGHDMSRMLE HPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGTNAADGAS FSDDTEEELL SMYLDMDKFN SSTATSSAAA
101: QVGEPSWRNE SVGMHTGSTS NPQNSFGERP RVRHQHSHSM DGSLNISEML VSGEGDDSVV DAKKSMSAAK LAELALIDPK RAKRIWANRQ SAARSKERKT
201: RYIFELERKV QTLQTEATTL SAQLTLLQRD TNGLTVENNE LKLRLQTMEQ QVHLQDELNE ALKEEIQHLK VLTGQAASNG ASSGMNYGSF GQQQQQFYSN
301: NQSMQTILAA QQLQQLQLHS QKQQQHQHQQ QQQFQFQQQQ IQQLMQHRLR QQEQQNGKQK PFNGQNES
101: QVGEPSWRNE SVGMHTGSTS NPQNSFGERP RVRHQHSHSM DGSLNISEML VSGEGDDSVV DAKKSMSAAK LAELALIDPK RAKRIWANRQ SAARSKERKT
201: RYIFELERKV QTLQTEATTL SAQLTLLQRD TNGLTVENNE LKLRLQTMEQ QVHLQDELNE ALKEEIQHLK VLTGQAASNG ASSGMNYGSF GQQQQQFYSN
301: NQSMQTILAA QQLQQLQLHS QKQQQHQHQQ QQQFQFQQQQ IQQLMQHRLR QQEQQNGKQK PFNGQNES
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
Arabidopsis Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.