Factsheet for Os09t0516200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G308600.1	Wheat	nucleus	80.53	81.38
TraesCS5B01G301900.1	Wheat	nucleus	80.0	80.64
TraesCS5A01G299400.1	Wheat	nucleus	79.74	80.37
Zm00001d021189_P001	Maize	nucleus	78.16	80.27
EER99183	Sorghum	nucleus	82.63	80.1
Zm00001d006127_P003	Maize	nucleus	77.37	79.25
HORVU5Hr1G079160.11	Barley	vacuole	80.26	68.54
CDY56611	Canola	nucleus	52.63	54.35
Bra018250.1-P	Field mustard	nucleus	53.16	54.01
CDY10799	Canola	nucleus	52.63	53.91
GSMUA_AchrUn_...	Banana	nucleus	56.05	53.38
GSMUA_Achr11P...	Banana	nucleus	52.37	53.21
CDY10170	Canola	nucleus	54.47	52.67
CDY19094	Canola	nucleus	43.95	52.52
CDY47713	Canola	nucleus	53.95	52.3
Bra015471.1-P	Field mustard	nucleus	53.95	52.3
Bra030637.1-P	Field mustard	nucleus	52.37	52.23
CDY15560	Canola	nucleus	52.11	51.97
CDY15381	Canola	nucleus	50.53	51.89
AT2G31370.6	Thale cress	nucleus	53.95	51.51
VIT_05s0102g01120.t01	Wine grape	nucleus	57.37	51.29
GSMUA_Achr11P...	Banana	nucleus	60.0	50.89
KRH10117	Soybean	nucleus	55.53	50.24
GSMUA_Achr5P25700_001	Banana	nucleus	46.84	50.14
CDX86537	Canola	nucleus	51.84	50.13
Solyc06g053350.2.1	Tomato	plastid	57.11	50.0
AT1G06070.1	Thale cress	nucleus	55.26	49.65
KRH23219	Soybean	nucleus	55.79	49.53
KRH29611	Soybean	nucleus	49.21	48.57
Bra021735.1-P	Field mustard	nucleus	43.16	48.38
KRH24606	Soybean	nucleus	48.68	46.6
Os03t0336200-02	Rice	nucleus	35.53	41.03
Os12t0162500-01	Rice	plasma membrane	35.0	40.55
Os11t0160500-01	Rice	nucleus, plasma membrane	23.68	38.14
Os10t0531900-01	Rice	nucleus	33.16	31.5
Os03t0127500-00	Rice	nucleus	34.21	30.52
Os01t0756200-01	Rice	nucleus	20.26	29.06
Os08t0543900-00	Rice	nucleus	32.89	26.94
Os04t0181300-00	Rice	nucleus	25.0	22.3
Os01t0211800-01	Rice	extracellular, nucleus	19.21	22.12
Os11t0218000-01	Rice	nucleus	17.37	18.13
Os09t0520400-01	Rice	nucleus	20.53	17.49
Os12t0194600-01	Rice	nucleus	16.84	17.34
Os02t0538900-01	Rice	mitochondrion, nucleus	13.95	16.26

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4347578	EMBL:AF005492	EMBL:AK102795	ProteinID:BAD33820.1
ProteinID:BAD34440.1	ProteinID:BAT08959.1	ProteinID:BAT08960.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlantsGene:Os09g0516200	EnsemblPlants:Os09t0516200-01	PFAM:PF00170
PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF80	UniProt:Q69IL4	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI00003FF475	RefSeq:XP_015612692.1	InterPro:bZIP	SEG:seg	:	:

Description

bZIP TRANSCRIPTION FACTOR RF2ASimilar to Transcription factor RF2a. (Os09t0516200-01);bZIP DNA-binding protein, Disease resistance, Vascular development (Os09t0516200-02)

Coordinates

chr9:-:20094196..20098433

Molecular Weight (calculated)

40649.9 Da

IEP (calculated)

6.655

GRAVY (calculated)

-0.650

Length

380 amino acids

Sequence
(BLAST)

001: MNREKSPIPG DGGDGLPPQA TRRAGPPAAA AAAEYDISRM PDFPTRNPGH RRAHSEILSL PEDLDLCAAG GGDGPSLSDE NDEELFSMFL DVEKLNSTCG
101: ASSEAEAESS SAGAAAAVAA AAAAAAHGAR PKHQHSLSMD ESMSIKAEEL VGASPGTEGM SSAEAKKAVS AAKLAELALV DPKRAKRIWA NRQSAARSKE
201: RKMRYIAELE RKVQTLQTEA TTLSAQLALL QRDTSGLTTE NSELKLRLQT MEQQVHLQDA LNDTLKSEVQ RLKVATGQMA NGGGMMMNFG GMPHQFGGNQ
301: QMFQNNQAMQ SMLAAHQLQQ LQLHPQAQQQ QVLHPQHQQQ QPLHPLQAQQ LQQAARDLKM KSPMGGQSQW GDGKSGSSGN

Best Arabidopsis Sequence Match ( AT1G06070.1 )
(BLAST)

001: MDKEKSPAPP PSGGLPPPSG RYSAFSPNGS SFAMKAESSF PPLTPSGSNS SDANRFSHDI SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGAAD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD

Arabidopsis Description

At1g06070 [Source:UniProtKB/TrEMBL;Acc:Q9LNE0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.