Factsheet for Os01t0756200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01493	Sorghum	nucleus	80.0	76.81
TraesCS3D01G293500.1	Wheat	nucleus	76.98	76.12
TraesCS3B01G328400.1	Wheat	nucleus	76.98	76.12
HORVU3Hr1G072770.1	Barley	nucleus	75.09	74.81
Zm00001d043420_P001	Maize	nucleus	78.11	74.46
Zm00001d012719_P001	Maize	nucleus	76.6	72.5
TraesCS3A01G293700.2	Wheat	nucleus	75.09	66.78
KRH27307	Soybean	plastid	52.83	49.12
KRH22014	Soybean	nucleus, plastid	58.11	48.12
VIT_19s0014g01780.t01	Wine grape	nucleus	55.09	47.25
PGSC0003DMT400032381	Potato	nucleus, plastid	49.81	45.67
Solyc07g062710.2.1	Tomato	nucleus, plastid	51.7	45.36
Os01t0211800-01	Rice	extracellular, nucleus	50.94	40.91
Os03t0336200-02	Rice	nucleus	29.06	23.4
Os11t0218000-01	Rice	nucleus	30.57	22.25
Os11t0160500-01	Rice	nucleus, plasma membrane	19.62	22.03
Os12t0162500-01	Rice	plasma membrane	26.04	21.04
Os12t0194600-01	Rice	nucleus	29.06	20.87
Os09t0516200-01	Rice	nucleus	29.06	20.26
Os02t0538900-01	Rice	mitochondrion, nucleus	23.77	19.33
Os10t0531900-01	Rice	nucleus	27.92	18.5
Os03t0127500-00	Rice	nucleus	29.06	18.08
Os08t0543900-00	Rice	nucleus	26.42	15.09
Os04t0181300-00	Rice	nucleus	20.38	12.68
Os09t0520400-01	Rice	nucleus	18.11	10.76

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4325139	EMBL:AK108553	ProteinID:BAD87301.1	ProteinID:BAF06200.1
ProteinID:BAS74407.1	ncoils:Coil	ProteinID:EEE55401.1	GO:GO:0000977	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045893	InterPro:IPR004827	EnsemblPlantsGene:Os01g0756200	EnsemblPlants:Os01t0756200-01
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF48	UniProt:Q5JMK6
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00004C292B	RefSeq:XP_015634100.1	InterPro:bZIP	SEG:seg

Description

b-ZIP TRANSCRIPTION FACTOR 6Similar to VirE2-interacting protein VIP1. (Os01t0756200-01)

Coordinates

chr1:+:31728015..31730360

Molecular Weight (calculated)

28402.0 Da

IEP (calculated)

6.748

GRAVY (calculated)

-0.651

Length

265 amino acids

Sequence
(BLAST)

001: MAQLPPKIPV AAPGHHQHWA SAGGAGDAAW ADEFAEFAAS RRGAHRRSLS DSVAFVEVAP AGCGAGGEFD RLDDDQLMSM FPDEGGSSAP GSDNGGSDSD
101: GGGDKHAAAQ SDDGQHAAGE PTQEQAAATS PTELIRDPKR VKRILANRQS AQRSRVRKLQ YISELERSVT TLQNEVSVLS PRVAFLDQQR TILTVGNSHL
201: KQRIAALAQD KIFKDAHQEA LRKEIERLRQ VYQQQNTKLS GGLAADHAHV HGGPPPVRAE KELMS

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.