Factsheet for Os03t0336200-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92641	Sorghum	nucleus	87.54	82.52
Zm00001d029064_P001	Maize	nucleus	83.89	79.77
Zm00001d047519_P001	Maize	nucleus	85.41	79.6
HORVU4Hr1G050190.1	Barley	nucleus	84.5	78.31
TraesCS4D01G171700.2	Wheat	nucleus	84.19	77.81
TraesCS4B01G169600.1	Wheat	nucleus	84.19	77.81
TraesCS4A01G135600.2	Wheat	nucleus	83.89	77.53
GSMUA_Achr2P18830_001	Banana	nucleus	58.97	67.36
GSMUA_Achr6P32530_001	Banana	nucleus	54.41	56.11
Bra000195.1-P	Field mustard	nucleus	42.25	41.62
Os12t0162500-01	Rice	plasma membrane	37.39	37.5
Os11t0160500-01	Rice	nucleus, plasma membrane	26.44	36.86
Os09t0516200-01	Rice	nucleus	41.03	35.53
Os01t0756200-01	Rice	nucleus	23.4	29.06
CDY13830	Canola	nucleus, plastid	26.14	28.01
Os10t0531900-01	Rice	nucleus	34.04	28.0
Os03t0127500-00	Rice	nucleus	35.56	27.46
Os08t0543900-00	Rice	nucleus	37.39	26.51
KRH35159	Soybean	nucleus	23.4	24.29
Os04t0181300-00	Rice	nucleus	25.84	19.95
Os01t0211800-01	Rice	extracellular, nucleus	19.76	19.7
CDY13829	Canola	cytosol	0.61	18.18
Os11t0218000-01	Rice	nucleus	19.45	17.58
Os12t0194600-01	Rice	nucleus	19.15	17.07
Os09t0520400-01	Rice	nucleus	22.8	16.82
Os02t0538900-01	Rice	mitochondrion, nucleus	15.2	15.34

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4332761	ProteinID:ABF95818.1	EMBL:AC125496	EMBL:AK059473
EMBL:AK070466	EMBL:AY466471	ProteinID:BAF11953.1	ProteinID:BAS84083.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlantsGene:Os03g0336200	EnsemblPlants:Os03t0336200-02
PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF84	UniProt:Q6S4P4	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0000DB4228	RefSeq:XP_015632816.1	InterPro:bZIP	SEG:seg	:

Description

bZIP TRANSCRIPTION FACTOR RF2BbZIP DNA-binding protein, Disease resistance, Vascular development (Os03t0336200-01);Transcription factor RF2b. (Os03t0336200-02)

Coordinates

chr3:+:12452164..12456329

Molecular Weight (calculated)

35808.0 Da

IEP (calculated)

7.046

GRAVY (calculated)

-0.684

Length

329 amino acids

Sequence
(BLAST)

001: MQEPKHTDPA AMRGAHHRRA RSEVAFRLPD DLDLGGGGAG AFDEIGSEDD LFSTFMDIEK ISSGPAAAGG SDRDRAAETS SPPRPKHRHS SSVDGSGFFA
101: AARKDAAASL AEVMEAKKAM TPEQLSELAA IDPKRAKRIL ANRQSAARSK ERKARYITEL ERKVQTLQTE ATTLSAQLTL FQRDTTGLSA ENAELKIRLQ
201: AMEQQAQLRD ALNDALKQEL ERLKLATGEM TNSNETYSMG LQHVPYNTPF FPLAQHNAAR QNGGTQLPPQ FQPPRPNVPN HMLSHPNGLQ DIMQQDPLGR
301: LQGLDISKGP LVVKSESSSI SASESSSTF

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.