Factsheet for Os08t0543900-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 26035336
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G268700.1	Wheat	nucleus	84.27	83.73
TraesCS7D01G269300.1	Wheat	nucleus	84.27	82.66
Zm00001d031723_P002	Maize	nucleus	82.54	82.37
Zm00001d052725_P001	Maize	nucleus	81.03	80.69
EES15257	Sorghum	nucleus	85.34	80.49
HORVU7Hr1G056490.1	Barley	nucleus, plastid	83.84	75.39
VIT_18s0001g13740.t01	Wine grape	nucleus	17.67	62.12
GSMUA_Achr3P12290_001	Banana	nucleus	51.94	48.2
Os03t0127500-00	Rice	nucleus	43.53	47.42
Os10t0531900-01	Rice	nucleus	40.52	47.0
Solyc04g081190.2.1	Tomato	nucleus	38.15	39.86
PGSC0003DMT400009538	Potato	nucleus	38.15	39.86
KRH61066	Soybean	nucleus, plastid	41.59	37.62
Os03t0336200-02	Rice	nucleus	26.51	37.39
KRH05913	Soybean	nucleus	41.81	35.08
KRH17396	Soybean	nucleus	40.95	33.99
Os12t0162500-01	Rice	plasma membrane	23.92	33.84
Os09t0516200-01	Rice	nucleus	26.94	32.89
Os11t0160500-01	Rice	nucleus, plasma membrane	16.59	32.63
KRH51734	Soybean	nucleus	27.59	31.92
Os04t0181300-00	Rice	nucleus	28.66	31.22
Os01t0756200-01	Rice	nucleus	15.09	26.42
Os09t0520400-01	Rice	nucleus	23.28	24.22
Os01t0211800-01	Rice	extracellular, nucleus	16.81	23.64
Os11t0218000-01	Rice	nucleus	15.3	19.51
Os12t0194600-01	Rice	nucleus	14.66	18.43
Os02t0538900-01	Rice	mitochondrion, nucleus	11.21	15.95

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4346208	ProteinID:BAF24317.2	ProteinID:BAT06521.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	EnsemblPlantsGene:Os08g0543900	EnsemblPlants:Os08t0543900-00	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690
PANTHER:PTHR13690:SF76	UniProt:Q0J3Z8	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0001B671A0	RefSeq:XP_015651132.1
InterPro:bZIP	SEG:seg	:	:	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 68Similar to Transcription factor RF2b. (Os08t0543900-00)

Coordinates

chr8:+:27237307..27241279

Molecular Weight (calculated)

49686.0 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.719

Length

464 amino acids

Sequence
(BLAST)

001: MDDPGAADPG ARPHHLSPGQ PPVVPRSPTP LDLSSAAAAA AAASYRRLSP SLRPPAHPQA RLPSPYPQIP SSSSAAAAGS SGHHARSLSQ PLFFSLDSLP
101: PLPYADLAAP PAIPPSPPSS SSDPPPPGLP PRKGGHRRSQ SDIPFGFSHL SPPLPPPAPV KREAATAAEG CRSDGDDFAL YDLVNSYMDL DGMEALNSSE
201: ERHEDRDSRA SGTRTGSVAD SSENEAESHS TPVERKDGGG KSRHCRSLSV DSFIEKLNFD ESPKLPLPSP SGGLSRSGSG SLDGGAASLF GAEFANGEFT
301: EAEKKKIMAN ERLAEIALTD PKRVKRILAN RQSAARSKER KMRYIQELEH KVQVLQTEAT TLSAQLTMLQ RDSTGLATQN NELKIRLQAM EQQAQLRDAL
401: NEALTAEVQR LKLATGEITD GRMSKGLQQQ MNSQLIQLQQ LQIQQQQSSQ TTQQGQQQQP QKSA

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.