Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0686700-01 | |
| Os09t0132600-01 | |
| Os09t0509000-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G04840.1 | Os04t0686700-01 | AT1G76920.1 | 21798944 |
| AT5G04840.1 | Os09t0132600-01 | AT3G15000.1 | 21798944 |
| AT5G04840.1 | Os09t0509000-01 | AT3G15000.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G187300.1 | Wheat | nucleus | 80.06 | 80.81 |
| TraesCS6B01G222800.1 | Wheat | nucleus | 79.45 | 80.19 |
| TraesCS6A01G203200.1 | Wheat | nucleus | 79.14 | 79.88 |
| HORVU6Hr1G051110.4 | Barley | nucleus | 78.83 | 79.81 |
| EES06922 | Sorghum | nucleus | 77.61 | 78.33 |
| Zm00001d016732_P003 | Maize | nucleus | 74.54 | 75.94 |
| Zm00001d050669_P001 | Maize | nucleus | 74.23 | 75.16 |
| GSMUA_Achr3P19190_001 | Banana | nucleus | 52.45 | 50.15 |
| GSMUA_Achr10P... | Banana | nucleus | 45.71 | 45.57 |
| GSMUA_Achr5P17400_001 | Banana | nucleus | 51.53 | 43.41 |
| PGSC0003DMT400005064 | Potato | nucleus | 37.12 | 39.54 |
| Solyc11g006490.1.1 | Tomato | nucleus | 35.89 | 38.11 |
| VIT_13s0073g00430.t01 | Wine grape | nucleus | 34.97 | 37.01 |
| AT5G04840.1 | Thale cress | plastid | 34.05 | 36.16 |
| CDX70198 | Canola | mitochondrion, nucleus | 32.21 | 34.2 |
| Bra009426.1-P | Field mustard | mitochondrion, nucleus | 31.9 | 33.88 |
| CDY44883 | Canola | mitochondrion, nucleus | 31.6 | 33.66 |
| Os01t0756200-01 | Rice | nucleus | 19.33 | 23.77 |
| Os12t0194600-01 | Rice | nucleus | 24.85 | 21.95 |
| Os11t0218000-01 | Rice | nucleus | 24.23 | 21.7 |
| Os01t0211800-01 | Rice | extracellular, nucleus | 20.55 | 20.3 |
| Os03t0336200-02 | Rice | nucleus | 15.34 | 15.2 |
| Os11t0160500-01 | Rice | nucleus, plasma membrane | 10.12 | 13.98 |
| Os09t0516200-01 | Rice | nucleus | 16.26 | 13.95 |
| Os12t0162500-01 | Rice | plasma membrane | 13.8 | 13.72 |
| Os10t0531900-01 | Rice | nucleus | 15.95 | 13.0 |
| Os03t0127500-00 | Rice | nucleus | 15.34 | 11.74 |
| Os08t0543900-00 | Rice | nucleus | 15.95 | 11.21 |
| Os09t0520400-01 | Rice | nucleus | 13.19 | 9.64 |
| Os04t0181300-00 | Rice | nucleus | 10.74 | 8.22 |
Protein Annotations
| EMBL:AK063644 | EMBL:HQ324808 | EnsemblPlants:Os02t0538900-01 | EnsemblPlantsGene:Os02g0538900 | EntrezGene:4329583 | Gene3D:1.20.5.170 |
| ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF251 | ProteinID:BAD27924.1 | ProteinID:BAD28835.1 | ProteinID:BAF08969.1 |
| ProteinID:BAS79087.1 | RefSeq:XP_015623493.1 | SEG:seg | UniParc:UPI00003CE55B | UniProt:Q6ER85 | MapMan:15.5.4.1 |
Description
b-ZIP TRANSCRIPTION FACTOR 21Basic-leucine zipper (bZIP) transcription factor domain containing protein. (Os02t0538900-01)
Coordinates
chr2:-:19962640..19967923
Molecular Weight (calculated)
35247.6 Da
IEP (calculated)
7.703
GRAVY (calculated)
-0.512
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSPHLPPR CPPLGPQITR RDDSLFTQSC RFPSEDPFVG EPPCWLDDLL ADSGKSHTLP PLRRACSDSD AILDVLTSFQ SPIYPIDEGD PQPVGEAGES
101: FNAAAEGGGS GAGIEGSCVY GPNSPRQKTR LTSSESSMVN AVLENVPSNP LQYLMIDATS GVNCNVGAAN GTGDTGDAVC HADQEKSLKR RSGQRSRVRK
201: LQYIADLERT VDSLQNIGAD LAVRVASLFQ LRNALSMENK QLRRQITSLQ QAKLIKDGQT QMLKKETERL KQLSVRHRRS RSVTSCFEAN SFGGGDPSAI
301: NWQMLDMSKL SLNGGAVVPP RGGYGM
101: FNAAAEGGGS GAGIEGSCVY GPNSPRQKTR LTSSESSMVN AVLENVPSNP LQYLMIDATS GVNCNVGAAN GTGDTGDAVC HADQEKSLKR RSGQRSRVRK
201: LQYIADLERT VDSLQNIGAD LAVRVASLFQ LRNALSMENK QLRRQITSLQ QAKLIKDGQT QMLKKETERL KQLSVRHRRS RSVTSCFEAN SFGGGDPSAI
301: NWQMLDMSKL SLNGGAVVPP RGGYGM
001: MSRPAPLPPR CPIPKKLSLS PVADTFYSSS SPIESYIGQY KSSTQDSRLE DQPAWLDELL CDKTDGLLTR GGPLRRSASD SVVLLGDISA TFSGFDQSED
101: EESLSSEACG DLESACVYGP NSPRAKNNSS FSNNPIASAF SDYGSQTPPQ NLDDTVKGIN RSPVAENACG SMGIPNAKRN PGQRSRVRKL QYIAELERTV
201: GMLQTVEADL SVRVASLLQT RATLSLENSQ LKQQMAILKQ DKLIREGEYQ LLKKEAQRLK SGLGYLGSTN NSNRLVRSYS AGSNVAPRTA SSHLDWNLLD
301: LTKLNLN
101: EESLSSEACG DLESACVYGP NSPRAKNNSS FSNNPIASAF SDYGSQTPPQ NLDDTVKGIN RSPVAENACG SMGIPNAKRN PGQRSRVRKL QYIAELERTV
201: GMLQTVEADL SVRVASLLQT RATLSLENSQ LKQQMAILKQ DKLIREGEYQ LLKKEAQRLK SGLGYLGSTN NSNRLVRSYS AGSNVAPRTA SSHLDWNLLD
301: LTKLNLN
Arabidopsis Description
At5g04840 [Source:UniProtKB/TrEMBL;Acc:Q8L5X9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.