Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os11t0160500-01 | |
| Os12t0162500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G43700.1 | Os11t0160500-01 | AT1G43700.1 | 15824315 |
| AT1G43700.1 | Os12t0162500-01 | AT1G43700.1 | 15824315 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0162500-01 | Rice | plasma membrane | 73.31 | 52.74 |
| Zm00001d041920_P001 | Maize | nucleus | 69.92 | 51.4 |
| EES15709 | Sorghum | nucleus | 75.42 | 51.0 |
| Zm00001d023507_P001 | Maize | nucleus, plastid | 72.88 | 43.22 |
| CDY71925 | Canola | nucleus | 46.19 | 42.91 |
| Solyc06g060490.2.1 | Tomato | nucleus | 49.58 | 42.24 |
| GSMUA_Achr6P18130_001 | Banana | nucleus | 52.12 | 41.98 |
| GSMUA_Achr10P... | Banana | nucleus | 52.97 | 39.94 |
| GSMUA_Achr6P13040_001 | Banana | nucleus | 47.03 | 39.08 |
| KRH70316 | Soybean | nucleus | 50.85 | 36.36 |
| PGSC0003DMT400045314 | Potato | nucleus | 50.0 | 36.2 |
| PGSC0003DMT400074878 | Potato | mitochondrion, nucleus | 38.98 | 35.25 |
| PGSC0003DMT400002100 | Potato | nucleus | 50.0 | 34.71 |
| Solyc04g071160.2.1 | Tomato | nucleus | 50.0 | 34.6 |
| Bra032191.1-P | Field mustard | nucleus | 47.88 | 34.24 |
| GSMUA_Achr10P... | Banana | nucleus | 48.73 | 34.23 |
| CDY48943 | Canola | nucleus | 34.75 | 34.02 |
| CDY30752 | Canola | nucleus | 47.46 | 33.94 |
| Bra034916.1-P | Field mustard | nucleus, plastid | 37.71 | 33.84 |
| GSMUA_Achr3P19170_001 | Banana | nucleus | 28.39 | 33.5 |
| CDX80722 | Canola | nucleus | 45.34 | 33.23 |
| VIT_18s0076g00330.t01 | Wine grape | nucleus | 48.73 | 32.86 |
| AT1G43700.1 | Thale cress | nucleus | 47.03 | 32.55 |
| Os03t0336200-02 | Rice | nucleus | 36.86 | 26.44 |
| KRH08713 | Soybean | nucleus | 47.46 | 26.29 |
| Os09t0516200-01 | Rice | nucleus | 38.14 | 23.68 |
| Os01t0756200-01 | Rice | nucleus | 22.03 | 19.62 |
| Os10t0531900-01 | Rice | nucleus | 32.63 | 19.25 |
| Os03t0127500-00 | Rice | nucleus | 32.2 | 17.84 |
| Os08t0543900-00 | Rice | nucleus | 32.63 | 16.59 |
| Os01t0211800-01 | Rice | extracellular, nucleus | 22.46 | 16.06 |
| Os04t0181300-00 | Rice | nucleus | 26.27 | 14.55 |
| Os09t0520400-01 | Rice | nucleus | 22.88 | 12.11 |
| Os11t0218000-01 | Rice | nucleus | 18.64 | 12.09 |
| Os12t0194600-01 | Rice | nucleus | 18.64 | 11.92 |
| Os02t0538900-01 | Rice | mitochondrion, nucleus | 13.98 | 10.12 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EMBL:AK099600 | UniProt:B7EPB8 | ProteinID:BAT12791.1 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlantsGene:Os11g0160500 | EnsemblPlants:Os11t0160500-01 | PFAM:PF00170 | PFscan:PS50217 |
| PANTHER:PTHR13690 | PANTHER:PTHR13690:SF86 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0000682496 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
b-ZIP TRANSCRIPTION FACTOR 81Similar to BZIP transcriptional activator RSG-related. (Os11t0160500-01)
Coordinates
chr11:+:2939274..2942815
Molecular Weight (calculated)
24572.0 Da
IEP (calculated)
7.630
GRAVY (calculated)
-0.400
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPRFPPPAP SGGAPPRGHH RRAHSETFIR LPDADLLLDP DGEFGFSDLD FPSLSDDSPA ASDPTPPPPP PALPQAAPRP PGGAHLRSLS LDAAFFDGLA
101: FQGGGGGGGA GSGSSGGGAG HKRSGSMDGE SSLFEGESAP PDYAKKAMPA DRLAELALLD PKRAKRILAN RQSAARSKER KIKYTGELER KVQTLQTEAT
201: TLSTQLTLLQ VCIIAQACGA SATTTIKVRL VLYLIS
101: FQGGGGGGGA GSGSSGGGAG HKRSGSMDGE SSLFEGESAP PDYAKKAMPA DRLAELALLD PKRAKRILAN RQSAARSKER KIKYTGELER KVQTLQTEAT
201: TLSTQLTLLQ VCIIAQACGA SATTTIKVRL VLYLIS
001: MEGGGRGPNQ TILSEIEHMP EAPRQRISHH RRARSETFFS GESIDDLLLF DPSDIDFSSL DFLNAPPPPQ QSQQQPQASP MSVDSEETSS NGVVPPNSLP
101: PKPEARFGRH VRSFSVDSDF FDDLGVTEEK FIATSSGEKK KGNHHHSRSN SMDGEMSSAS FNIESILASV SGKDSGKKNM GMGGDRLAEL ALLDPKRAKR
201: ILANRQSAAR SKERKIRYTG ELERKVQTLQ NEATTLSAQV TMLQRGTSEL NTENKHLKMR LQALEQQAEL RDALNEALRD ELNRLKVVAG EIPQGNGNSY
301: NRAQFSSQQS AMNQFGNKTN QQMSTNGQPS LPSYMDFTKR G
101: PKPEARFGRH VRSFSVDSDF FDDLGVTEEK FIATSSGEKK KGNHHHSRSN SMDGEMSSAS FNIESILASV SGKDSGKKNM GMGGDRLAEL ALLDPKRAKR
201: ILANRQSAAR SKERKIRYTG ELERKVQTLQ NEATTLSAQV TMLQRGTSEL NTENKHLKMR LQALEQQAEL RDALNEALRD ELNRLKVVAG EIPQGNGNSY
301: NRAQFSSQQS AMNQFGNKTN QQMSTNGQPS LPSYMDFTKR G
Arabidopsis Description
VIP1Transcription factor VIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.