Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004857_P001 | |
| Zm00001d023507_P001 | |
| Zm00001d041920_P001 | |
| Zm00001d053162_P003 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15709 | Sorghum | nucleus | 91.59 | 84.24 |
| Os12t0162500-01 | Rice | plasma membrane | 79.13 | 77.44 |
| Zm00001d053162_P003 | Maize | nucleus | 74.14 | 70.41 |
| Os11t0160500-01 | Rice | nucleus, plasma membrane | 51.4 | 69.92 |
| Zm00001d023507_P001 | Maize | nucleus, plastid | 86.6 | 69.85 |
| Zm00001d004857_P001 | Maize | nucleus | 73.83 | 67.71 |
| GSMUA_Achr3P19170_001 | Banana | nucleus | 41.43 | 66.5 |
| GSMUA_Achr6P18130_001 | Banana | nucleus | 54.83 | 60.07 |
| GSMUA_Achr10P... | Banana | nucleus | 57.63 | 59.11 |
| GSMUA_Achr6P13040_001 | Banana | nucleus | 49.84 | 56.34 |
| Solyc06g060490.2.1 | Tomato | nucleus | 46.42 | 53.79 |
| PGSC0003DMT400074878 | Potato | mitochondrion, nucleus | 42.37 | 52.11 |
| GSMUA_Achr10P... | Banana | nucleus | 52.96 | 50.6 |
| PGSC0003DMT400045314 | Potato | nucleus | 51.09 | 50.31 |
| CDY48943 | Canola | nucleus | 37.38 | 49.79 |
| VIT_18s0076g00330.t01 | Wine grape | nucleus | 51.71 | 47.43 |
| Bra034916.1-P | Field mustard | nucleus, plastid | 38.63 | 47.15 |
| Solyc04g071160.2.1 | Tomato | nucleus | 48.91 | 46.04 |
| PGSC0003DMT400002100 | Potato | nucleus | 48.6 | 45.88 |
| KRH70316 | Soybean | nucleus | 47.04 | 45.76 |
| Bra032191.1-P | Field mustard | nucleus | 46.73 | 45.45 |
| CDY30752 | Canola | nucleus | 46.42 | 45.15 |
| CDX80722 | Canola | nucleus | 44.24 | 44.1 |
| AT1G43700.1 | Thale cress | nucleus | 45.17 | 42.52 |
| CDY71925 | Canola | nucleus | 33.64 | 42.52 |
| Zm00001d021189_P001 | Maize | nucleus | 40.5 | 35.14 |
| KRH08713 | Soybean | nucleus | 45.48 | 34.27 |
| Zm00001d006127_P003 | Maize | nucleus | 39.56 | 34.23 |
| Zm00001d029064_P001 | Maize | nucleus | 34.89 | 32.37 |
| Zm00001d007172_P001 | Maize | plastid | 35.83 | 31.77 |
| Zm00001d047519_P001 | Maize | nucleus | 34.89 | 31.73 |
| Zm00001d003180_P001 | Maize | nucleus | 35.83 | 31.17 |
| Zm00001d022442_P001 | Maize | nucleus | 36.14 | 31.02 |
| Zm00001d052717_P001 | Maize | nucleus | 34.58 | 28.98 |
| Zm00001d048455_P001 | Maize | nucleus | 29.91 | 28.49 |
| Zm00001d031697_P001 | Maize | nucleus | 21.81 | 28.11 |
| Zm00001d029711_P001 | Maize | nucleus | 33.02 | 26.7 |
| Zm00001d027461_P001 | Maize | plastid | 31.78 | 23.94 |
| Zm00001d052725_P001 | Maize | nucleus | 33.64 | 23.18 |
| Zm00001d031723_P002 | Maize | nucleus | 33.33 | 23.01 |
| Zm00001d016154_P001 | Maize | nucleus | 17.76 | 22.62 |
| Zm00001d043420_P001 | Maize | nucleus | 19.31 | 22.3 |
| Zm00001d012719_P001 | Maize | nucleus | 19.31 | 22.14 |
| Zm00001d053442_P001 | Maize | nucleus | 17.13 | 21.32 |
| Zm00001d039383_P001 | Maize | nucleus | 18.69 | 20.83 |
| Zm00001d021191_P001 | Maize | plastid | 29.28 | 20.61 |
| Zm00001d006157_P001 | Maize | nucleus | 28.35 | 19.0 |
| Zm00001d035240_P001 | Maize | nucleus | 12.46 | 17.7 |
| Zm00001d041831_P001 | Maize | mitochondrion | 17.13 | 15.8 |
| Zm00001d049135_P001 | Maize | mitochondrion | 16.51 | 15.19 |
| Zm00001d016732_P003 | Maize | nucleus | 12.77 | 12.81 |
| Zm00001d050669_P001 | Maize | nucleus | 12.46 | 12.42 |
| Zm00001d007364_P001 | Maize | nucleus | 19.63 | 9.89 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100193330 | MapMan:15.5.4.1 | UniProt:A0A1D6MZQ6 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | ProteinID:ONM34076.1 |
| PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF86 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0001B3731F | EnsemblPlantsGene:Zm00001d041920 | EnsemblPlants:Zm00001d041920_P001 | EnsemblPlants:Zm00001d041920_T001 | InterPro:bZIP | SEG:seg |
Description
bZIP-transcription factor 8Transcription factor PosF21
Coordinates
chr3:-:143644925..143649063
Molecular Weight (calculated)
34627.4 Da
IEP (calculated)
6.925
GRAVY (calculated)
-0.698
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPRFTLPAA IGGGAGRVHH RRAHSESFLC FSDADLLLDP DGDLSFSDLD FPSLSDDSPA ASDPTPPPPL PQPAPAPRPA GGAHTRSLSL DAAFFEGLAF
101: QGPSGSAGGG PGHKRSGSMD GATSPFEGES ALSSGLPDYA KKAMPAERIA ELALIDPKRA KRILANRQSA ARSKERKVKY TSELEKKVQT LQTEATTLSA
201: QLTLLQRDTT GLTAENRELK LRLQSMEEQA KLRDALNETL REEVQRLKIA AGQVGNMNGN PFNGGLQQQI PSYFVQQQQM SYFGGHQAQA QHHSQNHHHR
301: SPSNGRQSPS DQSLNDSMDF V
101: QGPSGSAGGG PGHKRSGSMD GATSPFEGES ALSSGLPDYA KKAMPAERIA ELALIDPKRA KRILANRQSA ARSKERKVKY TSELEKKVQT LQTEATTLSA
201: QLTLLQRDTT GLTAENRELK LRLQSMEEQA KLRDALNETL REEVQRLKIA AGQVGNMNGN PFNGGLQQQI PSYFVQQQQM SYFGGHQAQA QHHSQNHHHR
301: SPSNGRQSPS DQSLNDSMDF V
001: MEGGGRGPNQ TILSEIEHMP EAPRQRISHH RRARSETFFS GESIDDLLLF DPSDIDFSSL DFLNAPPPPQ QSQQQPQASP MSVDSEETSS NGVVPPNSLP
101: PKPEARFGRH VRSFSVDSDF FDDLGVTEEK FIATSSGEKK KGNHHHSRSN SMDGEMSSAS FNIESILASV SGKDSGKKNM GMGGDRLAEL ALLDPKRAKR
201: ILANRQSAAR SKERKIRYTG ELERKVQTLQ NEATTLSAQV TMLQRGTSEL NTENKHLKMR LQALEQQAEL RDALNEALRD ELNRLKVVAG EIPQGNGNSY
301: NRAQFSSQQS AMNQFGNKTN QQMSTNGQPS LPSYMDFTKR G
101: PKPEARFGRH VRSFSVDSDF FDDLGVTEEK FIATSSGEKK KGNHHHSRSN SMDGEMSSAS FNIESILASV SGKDSGKKNM GMGGDRLAEL ALLDPKRAKR
201: ILANRQSAAR SKERKIRYTG ELERKVQTLQ NEATTLSAQV TMLQRGTSEL NTENKHLKMR LQALEQQAEL RDALNEALRD ELNRLKVVAG EIPQGNGNSY
301: NRAQFSSQQS AMNQFGNKTN QQMSTNGQPS LPSYMDFTKR G
Arabidopsis Description
VIP1Transcription factor VIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.