Factsheet for Zm00001d041831_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23197	Sorghum	mitochondrion	93.68	90.3
Os12t0194600-01	Rice	nucleus	82.47	77.78
Zm00001d035240_P001	Maize	nucleus	47.7	73.45
HORVU5Hr1G031130.2	Barley	mitochondrion	68.68	66.39
Zm00001d049135_P001	Maize	mitochondrion	65.23	65.04
Bra035464.1-P	Field mustard	nucleus	26.72	52.84
VIT_12s0035g00620.t01	Wine grape	nucleus	52.3	48.66
GSMUA_Achr8P29390_001	Banana	nucleus	48.56	46.17
PGSC0003DMT400064169	Potato	nucleus	47.7	45.48
KRH59143	Soybean	nucleus	48.56	45.07
KRH43037	Soybean	nucleus	47.99	44.41
CDY46864	Canola	nucleus	41.95	43.71
CDY23807	Canola	nucleus	41.95	43.45
Solyc11g020950.1.1	Tomato	nucleus	38.22	40.8
Bra027885.1-P	Field mustard	nucleus	43.1	40.21
CDY39913	Canola	nucleus	42.82	40.16
CDY29162	Canola	nucleus	42.82	39.84
GSMUA_Achr9P00300_001	Banana	nucleus	42.82	39.63
AT1G58110.2	Thale cress	nucleus	42.53	39.57
PGSC0003DMT400024003	Potato	nucleus	39.37	39.48
VIT_18s0001g03010.t01	Wine grape	nucleus	30.75	39.34
AT4G06598.1	Thale cress	nucleus	27.59	36.23
Solyc10g044830.1.1	Tomato	nucleus	25.0	35.22
GSMUA_Achr3P02820_001	Banana	golgi	40.23	34.91
Zm00001d039383_P001	Maize	nucleus	24.71	29.86
CDY48939	Canola	nucleus	26.44	29.77
Zm00001d016154_P001	Maize	nucleus	21.26	29.37
Zm00001d012719_P001	Maize	nucleus	23.56	29.29
Zm00001d053442_P001	Maize	nucleus	21.55	29.07
Bra034913.1-P	Field mustard	nucleus	18.39	28.83
Zm00001d043420_P001	Maize	nucleus	22.7	28.42
AT1G35490.1	Thale cress	nucleus	24.14	28.0
CDX80717	Canola	nucleus, plastid	25.29	27.5
Zm00001d050669_P001	Maize	nucleus	25.0	27.02
Zm00001d016732_P003	Maize	nucleus	23.56	25.62
Zm00001d006127_P003	Maize	nucleus	19.83	18.6
Zm00001d021189_P001	Maize	nucleus	19.54	18.38
Zm00001d047519_P001	Maize	nucleus	18.39	18.13
Zm00001d029064_P001	Maize	nucleus	17.82	17.92
Zm00001d053162_P003	Maize	nucleus	17.24	17.75
Zm00001d048455_P001	Maize	nucleus	16.95	17.51
Zm00001d041920_P001	Maize	nucleus	15.8	17.13
Zm00001d003180_P001	Maize	nucleus	18.1	17.07
Zm00001d031697_P001	Maize	nucleus	12.07	16.87
Zm00001d022442_P001	Maize	nucleus	17.82	16.58
Zm00001d004857_P001	Maize	nucleus	16.67	16.57
Zm00001d007172_P001	Maize	plastid	16.95	16.3
Zm00001d052717_P001	Maize	nucleus	17.53	15.93
Zm00001d029711_P001	Maize	nucleus	18.1	15.87
Zm00001d023507_P001	Maize	nucleus, plastid	18.1	15.83
Zm00001d027461_P001	Maize	plastid	18.68	15.26
Zm00001d031723_P002	Maize	nucleus	18.1	13.55
Zm00001d052725_P001	Maize	nucleus	17.82	13.3
Zm00001d021191_P001	Maize	plastid	17.24	13.16
Zm00001d006157_P001	Maize	nucleus	15.8	11.48
Zm00001d007364_P001	Maize	nucleus	10.92	5.97

Protein Annotations

EntrezGene:100281065	MapMan:15.5.4.1	Gene3D:3.30.160.60	UniProt:B6SRX0	ncoils:Coil	EMBL:EU955485
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	ProteinID:ONM33773.1	ProteinID:ONM33774.1	PANTHER:PTHR13301
PANTHER:PTHR13301:SF25	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000182B9B9	EnsemblPlantsGene:Zm00001d041831	EnsemblPlants:Zm00001d041831_P001
EnsemblPlants:Zm00001d041831_T001	InterPro:bZIP	SEG:seg	:	:	:

Description

DNA binding protein

Coordinates

chr3:+:139605736..139609752

Molecular Weight (calculated)

39140.8 Da

IEP (calculated)

9.304

GRAVY (calculated)

-0.966

Length

348 amino acids

Sequence
(BLAST)

001: MMANGRFQKQ ALLPPRSPFP VAAPHAELGP IARPRETPHR HGHQRTSSES FLADEQPSWL DDLLDEPETP ARAHGRPGHR RSSSDSFALF EGGSAAGGMY
101: EFDNVLDGMR GGGQVASLAG APEFFPEPAS FGRPWESRQM YRQGGGMPMP GREKNGGRHG PSSSFGEHEL GHVPNGVNRK AHGDAAYDQR IVIERKEGLR
201: HSQSETDTKR AKQQYAQRSR VRKLQYIAEL ERRVQSLQTE GIEVTAEMDF LGQQNIMLDL ENKALKQRLE SLSQEHLIKR YQQEMFEREI GRLRTLFQQQ
301: QQQQHVPQQQ APTHSRSNSR DLDSQFANLS LKHSDPSSGR DAISGLRI

Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)

001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.