Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48939 | Canola | nucleus | 76.67 | 74.43 |
| Bra034913.1-P | Field mustard | nucleus | 54.67 | 73.87 |
| CDX80717 | Canola | nucleus, plastid | 71.67 | 67.19 |
| PGSC0003DMT400024003 | Potato | nucleus | 37.67 | 32.56 |
| Solyc11g020950.1.1 | Tomato | nucleus | 35.33 | 32.52 |
| VIT_18s0001g03010.t01 | Wine grape | nucleus | 29.33 | 32.35 |
| GSMUA_Achr8P29390_001 | Banana | nucleus | 32.0 | 26.23 |
| Zm00001d049135_P001 | Maize | mitochondrion | 30.0 | 25.79 |
| Os11t0218000-01 | Rice | nucleus | 30.67 | 25.27 |
| KXG28232 | Sorghum | mitochondrion | 30.0 | 25.14 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 28.33 | 24.57 |
| TraesCS4B01G108000.1 | Wheat | nucleus | 28.33 | 24.57 |
| TraesCS4D01G105100.1 | Wheat | mitochondrion | 28.0 | 24.28 |
| Zm00001d041831_P001 | Maize | mitochondrion | 28.0 | 24.14 |
| AT1G58110.2 | Thale cress | nucleus | 30.0 | 24.06 |
| KXG23197 | Sorghum | mitochondrion | 28.33 | 23.55 |
| GSMUA_Achr9P00300_001 | Banana | nucleus | 29.33 | 23.4 |
| HORVU5Hr1G031130.2 | Barley | mitochondrion | 27.0 | 22.5 |
| Os12t0194600-01 | Rice | nucleus | 27.67 | 22.49 |
| Zm00001d035240_P001 | Maize | nucleus | 16.33 | 21.68 |
| GSMUA_Achr3P02820_001 | Banana | golgi | 28.67 | 21.45 |
| AT4G06598.1 | Thale cress | nucleus | 18.67 | 21.13 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 28.67 | 20.87 |
| AT2G42380.2 | Thale cress | nucleus, plastid | 22.0 | 20.56 |
| AT3G58120.1 | Thale cress | nucleus | 21.67 | 19.76 |
| AT5G04840.1 | Thale cress | plastid | 20.0 | 19.54 |
| AT1G43700.1 | Thale cress | nucleus | 15.67 | 13.78 |
| AT2G31370.6 | Thale cress | nucleus | 18.0 | 13.57 |
| AT1G06070.1 | Thale cress | nucleus | 19.0 | 13.48 |
| AT2G40620.1 | Thale cress | nucleus | 15.67 | 12.81 |
| AT1G06850.1 | Thale cress | nucleus | 14.33 | 12.76 |
| AT2G12900.1 | Thale cress | plastid | 11.0 | 12.5 |
| AT2G13150.1 | Thale cress | plastid | 10.33 | 11.83 |
| AT2G21230.3 | Thale cress | nucleus | 17.0 | 9.71 |
| AT2G12940.1 | Thale cress | plastid | 9.33 | 9.52 |
| AT4G38900.1 | Thale cress | nucleus | 16.33 | 8.86 |
Protein Annotations
| MapMan:35.2 | EntrezGene:840442 | EMBL:AB493496 | ProteinID:AEE31800.1 | ProteinID:ANM59631.1 | ArrayExpress:AT1G35490 |
| EnsemblPlantsGene:AT1G35490 | RefSeq:AT1G35490 | TAIR:AT1G35490 | RefSeq:AT1G35490-TAIR-G | EnsemblPlants:AT1G35490.1 | TAIR:AT1G35490.1 |
| Unigene:At.39569 | UniProt:C0SUZ3 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045893 | RefSeq:NP_001321975.1 | RefSeq:NP_564460.1 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13301 |
| PANTHER:PTHR13301:SF25 | UniParc:UPI0000162FA5 | SEG:seg | : | : | : |
Description
BZIP family transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUZ3]
Coordinates
chr1:+:13061549..13063455
Molecular Weight (calculated)
34512.6 Da
IEP (calculated)
9.677
GRAVY (calculated)
-0.981
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLRRLSNP GNFGFIGRSQ SRVPQKNMEN NISPPNNMHH HSASLDDLFT EDQPAWLDEL LSEPASPKIN KGHRRSASDT AAYLNSALMP SKENHVAGSS
101: WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV
201: LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI
101: WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV
201: LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.