CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041831_P001	Maize	mitochondrion	90.3	93.68
Os12t0194600-01	Rice	nucleus	83.93	82.11
Zm00001d035240_P001	Maize	nucleus	48.75	77.88
HORVU5Hr1G031130.2	Barley	mitochondrion	70.36	70.56
KXG28232	Sorghum	mitochondrion	67.59	68.16
Bra035464.1-P	Field mustard	nucleus	26.32	53.98
VIT_12s0035g00620.t01	Wine grape	nucleus	51.52	49.73
GSMUA_Achr8P29390_001	Banana	nucleus	48.48	47.81
PGSC0003DMT400064169	Potato	nucleus	46.54	46.03
KRH59143	Soybean	nucleus	47.09	45.33
KRH43037	Soybean	nucleus	46.54	44.68
CDY46864	Canola	nucleus	41.27	44.61
CDY23807	Canola	nucleus	41.27	44.35
Solyc11g020950.1.1	Tomato	nucleus	37.67	41.72
Bra027885.1-P	Field mustard	nucleus	42.94	41.55
CDY39913	Canola	nucleus	42.38	41.24
VIT_18s0001g03010.t01	Wine grape	nucleus	31.02	41.18
CDY29162	Canola	nucleus	42.38	40.91
AT1G58110.2	Thale cress	nucleus	42.11	40.64
PGSC0003DMT400024003	Potato	nucleus	38.78	40.35
GSMUA_Achr9P00300_001	Banana	nucleus	41.27	39.63
GSMUA_Achr3P02820_001	Banana	golgi	40.72	36.66
Solyc10g044830.1.1	Tomato	nucleus	24.65	36.03
AT4G06598.1	Thale cress	nucleus	26.32	35.85
EES04836	Sorghum	nucleus	21.88	30.5
CDY48939	Canola	nucleus	25.48	29.77
EES01493	Sorghum	nucleus	22.71	29.71
Bra034913.1-P	Field mustard	nucleus	17.45	28.38
AT1G35490.1	Thale cress	nucleus	23.55	28.33
CDX80717	Canola	nucleus, plastid	24.38	27.5
EES06922	Sorghum	nucleus	24.1	26.93
EES00074	Sorghum	nucleus, plastid	25.21	22.09
OQU92641	Sorghum	nucleus	18.01	18.62
EES15709	Sorghum	nucleus	17.73	18.34
EER99183	Sorghum	nucleus	19.39	17.86
EES12438	Sorghum	nucleus	18.56	17.72
EES08023	Sorghum	nucleus	16.62	17.65
EES14151	Sorghum	nucleus	17.73	16.75
KXG40277	Sorghum	nucleus	19.67	16.47
OQU92255	Sorghum	nucleus	13.85	16.39
OQU90478	Sorghum	nucleus	16.9	16.14
EES15257	Sorghum	nucleus	18.28	13.41
EER97061	Sorghum	nucleus	17.73	12.8
OQU89248	Sorghum	nucleus	6.09	9.13
OQU83785	Sorghum	plastid	11.08	6.19
OQU83493	Sorghum	nucleus	12.19	5.76

Protein Annotations

MapMan:15.5.4.1	Gene3D:3.30.160.60	UniProt:A0A1B6PC57	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	EnsemblPlants:KXG23197	ProteinID:KXG23197	ProteinID:KXG23197.1	PANTHER:PTHR13301	PANTHER:PTHR13301:SF25
SMART:SM00338	EnsemblPlantsGene:SORBI_3008G067900	SUPFAM:SSF57959	UniParc:UPI00081ADB37	InterPro:bZIP	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:7791893..7795999

Molecular Weight (calculated)

40062.7 Da

IEP (calculated)

9.652

GRAVY (calculated)

-0.965

Length

361 amino acids

Sequence
(BLAST)

001: MMANGRLQKQ ALLPPRSPFP VAAAAGAAPH AELGPIARPR DAHHRHGHQR TSSESFLADE QPSWLDDLLD EPESPAARAH GRPGHRRSSS DSFALFEGGS
101: SAAAGGMYDN VLDGMRGGGG GQVASWAGAP EFFPEPTSFG RPQGRPWESR PMYRQGGGMP MPGREKNAGR HGPSSSFADH EHGHVPNGVD RKGHGDVAHD
201: QRIVAERKEG LRHSQSEADT KRAKQQYAQR SRVRKLQYIA ELERRVQSLQ TEGIEVTAEM DFLGQQNIML DLENKALKQR LESLSQEHLI KRYQQEMFER
301: EIGRLRTLFQ QQQQQQQHVP QQQAPSHSRS NSRDLDSQFA NLSLKHSDPS SGRDAVSGLR I

Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)

001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.