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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48939 Canola nucleus 90.0 93.2
Bra034913.1-P Field mustard nucleus 63.44 91.44
AT1G35490.1 Thale cress nucleus 67.19 71.67
PGSC0003DMT400024003 Potato nucleus 34.38 31.7
Solyc11g020950.1.1 Tomato nucleus 31.88 31.29
VIT_18s0001g03010.t01 Wine grape nucleus 25.62 30.15
CDY23807 Canola nucleus 28.75 27.38
CDY13829 Canola cytosol 0.94 27.27
CDY46864 Canola nucleus 28.44 27.25
GSMUA_Achr8P29390_001 Banana nucleus 29.69 25.96
CDY39913 Canola nucleus 30.0 25.88
CDY29162 Canola nucleus 30.0 25.67
Zm00001d041831_P001 Maize mitochondrion 27.5 25.29
Os11t0218000-01 Rice nucleus 28.12 24.73
KXG28232 Sorghum mitochondrion 27.5 24.58
KXG23197 Sorghum mitochondrion 27.5 24.38
Zm00001d049135_P001 Maize mitochondrion 26.56 24.36
TraesCS4A01G204300.1 Wheat nucleus 25.94 23.99
TraesCS4B01G108000.1 Wheat nucleus 25.94 23.99
GSMUA_Achr9P00300_001 Banana nucleus 28.12 23.94
HORVU5Hr1G031130.2 Barley mitochondrion 26.88 23.89
Os12t0194600-01 Rice nucleus 27.5 23.85
TraesCS4D01G105100.1 Wheat mitochondrion 25.62 23.7
GSMUA_Achr3P02820_001 Banana golgi 28.75 22.94
Zm00001d035240_P001 Maize nucleus 15.31 21.68
CDY35379 Canola nucleus, plastid 18.12 21.64
CDY22561 Canola nucleus, plastid 17.81 21.27
CDY64520 Canola nucleus, plastid 18.12 21.25
CDY56238 Canola extracellular 8.75 20.9
CDX71000 Canola nucleus, plastid 18.12 20.79
CDY06053 Canola nucleus 18.44 20.77
CDX79872 Canola nucleus, plastid 18.12 20.71
CDX71974 Canola nucleus, plastid 17.19 20.6
CDX70198 Canola mitochondrion, nucleus 19.69 20.52
HORVU4Hr1G016340.4 Barley nucleus, plastid 26.25 20.39
CDY44883 Canola mitochondrion, nucleus 18.75 19.61
CDX98266 Canola nucleus, plastid 18.12 19.46
CDY19094 Canola nucleus 15.94 16.04
CDY35020 Canola nucleus 8.75 15.91
CDY06974 Canola nucleus 16.56 15.06
CDY13830 Canola nucleus, plastid 14.38 14.98
CDY15560 Canola nucleus 17.81 14.96
CDX93167 Canola nucleus 15.94 14.87
CDY15381 Canola nucleus 17.19 14.86
CDY06231 Canola nucleus 15.0 14.77
CDY15590 Canola nucleus 14.69 14.64
CDY09952 Canola nucleus 15.0 14.63
CDX80722 Canola nucleus 14.69 14.6
CDY10799 Canola nucleus 16.88 14.56
CDY30752 Canola nucleus 15.0 14.55
CDY47713 Canola nucleus 17.81 14.54
CDX86537 Canola nucleus 17.81 14.5
CDY10170 Canola nucleus 17.81 14.5
CDY56611 Canola nucleus 16.56 14.4
CDY71925 Canola nucleus 11.25 14.17
CDX86512 Canola nucleus 14.06 14.15
CDY48943 Canola nucleus 10.62 14.11
CDY23889 Canola nucleus 15.62 14.08
CDX79976 Canola nucleus 15.31 13.76
CDX82008 Canola nucleus 15.94 13.71
CDY24896 Canola nucleus 13.75 12.98
CDY15909 Canola plastid 17.5 12.61
CDY07597 Canola nucleus 13.12 12.57
CDX99610 Canola nucleus 16.88 12.22
CDX82009 Canola plastid 14.38 12.01
CDY70502 Canola nucleus 14.38 11.92
CDY13828 Canola plastid 14.38 11.89
CDY12108 Canola nucleus 14.69 11.03
CDX72732 Canola nucleus 15.0 10.88
CDY22407 Canola nucleus 15.0 10.79
CDX90298 Canola nucleus 14.69 10.73
Protein Annotations
EnsemblPlants:CDX80717EnsemblPlantsGene:GSBRNA2T00133996001PANTHER:PTHR13301PANTHER:PTHR13301:SF25ProteinID:CDX80717ProteinID:CDX80717.1
SEG:segUniParc:UPI0004EEEA77MapMan:35.2:::
Description
BnaC08g05510D
Coordinates
chrLK031822:+:1079702..1081562
Molecular Weight (calculated)
36041.8 Da
IEP (calculated)
9.713
GRAVY (calculated)
-1.023
Length
320 amino acids
Sequence
(BLAST)
001: MEGSGSLSNA GNFGSVGRQS QASQMNRENS ISPPSNMHHH SASLNNLLID EQPPWLDDLL SEPASPKINK GHRRSASDTS AYLNSAFMPF REDDLLNSHF
101: SGPSGLVQNI NRHDDLWQPN SYDNHGKLGW EFSNKNGTNF QTRVSWGAVN KAGTSASKSA ETQVSKMKEG SFTKPDGPGS KTDSKRIKHQ NAHRARLRRL
201: EYISDLERTI QVLQAQGCEM SSAIHYLDQQ LVMLSMENRA LKQRLDSLAE IQKLKHVEQQ FLEREIGNLK FRKHQQQPQQ NQKQMQQNRY DTTAHPPHRN
301: PSPSLQPWQY DLGNSGSSSS
Best Arabidopsis Sequence Match ( AT1G35490.1 )
(BLAST)
001: MENLRRLSNP GNFGFIGRSQ SRVPQKNMEN NISPPNNMHH HSASLDDLFT EDQPAWLDEL LSEPASPKIN KGHRRSASDT AAYLNSALMP SKENHVAGSS
101: WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV
201: LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI
Arabidopsis Description
BZIP family transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUZ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.