Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030663.1-P | Field mustard | nucleus | 84.66 | 46.56 |
| CDX86512 | Canola | nucleus | 84.09 | 46.54 |
| CDY15590 | Canola | nucleus | 84.66 | 46.42 |
| CDY06231 | Canola | nucleus | 81.82 | 44.31 |
| CDY09952 | Canola | nucleus | 81.82 | 43.9 |
| AT1G06850.1 | Thale cress | nucleus | 80.11 | 41.84 |
| VIT_06s0004g08070.t01 | Wine grape | plastid | 63.64 | 32.75 |
| KRH17183 | Soybean | plastid | 63.07 | 30.66 |
| KRH72827 | Soybean | plastid | 61.93 | 29.95 |
| CDX93167 | Canola | nucleus | 56.25 | 28.86 |
| CDY23889 | Canola | nucleus | 57.39 | 28.45 |
| CDY06974 | Canola | nucleus | 56.25 | 28.12 |
| CDX79976 | Canola | nucleus | 56.82 | 28.09 |
| KRG98137 | Soybean | nucleus | 60.23 | 27.89 |
| KRH30482 | Soybean | nucleus | 60.23 | 27.53 |
| CDY48943 | Canola | nucleus | 37.5 | 27.39 |
| CDY24896 | Canola | nucleus | 47.73 | 24.78 |
| CDY07597 | Canola | nucleus | 42.05 | 22.16 |
| CDX80722 | Canola | nucleus | 38.07 | 20.81 |
| CDY56611 | Canola | nucleus | 41.48 | 19.84 |
| CDY30752 | Canola | nucleus | 36.93 | 19.7 |
| CDY19094 | Canola | nucleus | 35.23 | 19.5 |
| CDY10799 | Canola | nucleus | 40.91 | 19.41 |
| CDY56238 | Canola | extracellular | 14.77 | 19.4 |
| CDY15381 | Canola | nucleus | 39.2 | 18.65 |
| CDY10170 | Canola | nucleus | 40.91 | 18.32 |
| CDY15560 | Canola | nucleus | 39.2 | 18.11 |
| CDY47713 | Canola | nucleus | 39.77 | 17.86 |
| CDX86537 | Canola | nucleus | 39.2 | 17.56 |
| CDY13830 | Canola | nucleus, plastid | 30.11 | 17.26 |
| CDX72732 | Canola | nucleus | 39.77 | 15.87 |
| CDY22407 | Canola | nucleus | 39.2 | 15.51 |
| CDY12108 | Canola | nucleus | 37.5 | 15.49 |
| CDX90298 | Canola | nucleus | 36.36 | 14.61 |
| CDY15909 | Canola | plastid | 36.36 | 14.41 |
| CDX99610 | Canola | nucleus | 35.8 | 14.25 |
| CDX71974 | Canola | nucleus, plastid | 21.02 | 13.86 |
| CDY22561 | Canola | nucleus, plastid | 21.02 | 13.81 |
| CDX82008 | Canola | nucleus | 28.98 | 13.71 |
| CDX71000 | Canola | nucleus, plastid | 21.59 | 13.62 |
| CDX79872 | Canola | nucleus, plastid | 21.59 | 13.57 |
| CDY71925 | Canola | nucleus | 19.32 | 13.39 |
| CDY64520 | Canola | nucleus, plastid | 20.45 | 13.19 |
| CDY35379 | Canola | nucleus, plastid | 19.89 | 13.06 |
| CDY06053 | Canola | nucleus | 21.02 | 13.03 |
| CDX98266 | Canola | nucleus, plastid | 21.02 | 12.42 |
| CDY46864 | Canola | nucleus | 21.02 | 11.08 |
| CDY23807 | Canola | nucleus | 21.02 | 11.01 |
| CDY39913 | Canola | nucleus | 22.16 | 10.51 |
| CDY29162 | Canola | nucleus | 22.16 | 10.43 |
| CDY44883 | Canola | mitochondrion, nucleus | 17.61 | 10.13 |
| CDX70198 | Canola | mitochondrion, nucleus | 17.61 | 10.1 |
| CDY48939 | Canola | nucleus | 15.91 | 9.06 |
| CDX80717 | Canola | nucleus, plastid | 15.91 | 8.75 |
| CDX82009 | Canola | plastid | 18.18 | 8.36 |
| CDY70502 | Canola | nucleus | 18.18 | 8.29 |
| CDY13828 | Canola | plastid | 17.05 | 7.75 |
| CDY13829 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078H9D5 | UniProt:A0A078H9D5 | EnsemblPlants:CDY35020 | ProteinID:CDY35020 |
| ProteinID:CDY35020.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00057858001 | InterPro:IPR004827 |
| PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF82 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EEB1DB |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC06g13660DBnaC06g13660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9D5]
Coordinates
chrLK032345:-:53274..54577
Molecular Weight (calculated)
19887.6 Da
IEP (calculated)
10.553
GRAVY (calculated)
-0.865
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPVKLLKET LKEVRNDWLS DGSVPLKRHG VRRRRQSAAR SKERKARYIQ ELERRVQSLQ TEATTLSAQL TLFQRDTNGL ANENTELKMR LQAMEQQAHL
101: RNALNEALRK KVERMKMETG EISGKSDSFD MGMQQSVSEF LQNGRLQGLE ISSNNSSSLV KSEGPSLSGS ESSSAY
101: RNALNEALRK KVERMKMETG EISGKSDSFD MGMQQSVSEF LQNGRLQGLE ISSNNSSSLV KSEGPSLSGS ESSSAY
001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY
Arabidopsis Description
AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.