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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79872 Canola nucleus, plastid 98.57 98.21
CDY64520 Canola nucleus, plastid 96.06 98.17
Bra004689.1-P Field mustard nucleus, plastid 98.92 90.2
CDY22561 Canola nucleus, plastid 74.55 77.61
CDY35379 Canola nucleus, plastid 74.19 77.24
CDY06053 Canola nucleus 73.84 72.54
AT2G42380.2 Thale cress nucleus, plastid 82.08 71.34
CDX71974 Canola nucleus, plastid 67.74 70.79
CDY56238 Canola extracellular 33.33 69.4
CDX98266 Canola nucleus, plastid 71.68 67.11
KRH22317 Soybean nucleus 66.31 59.49
KRH27013 Soybean nucleus 66.67 58.12
VIT_12s0028g02590.t01 Wine grape nucleus, plastid 60.22 56.95
PGSC0003DMT400024289 Potato nucleus 61.29 56.44
KRH25692 Soybean nucleus, plastid 66.31 56.06
KRH55826 Soybean nucleus, plastid 67.38 55.29
Solyc07g053450.2.1 Tomato nucleus 54.48 53.52
Solyc12g010800.1.1 Tomato nucleus 56.27 51.31
PGSC0003DMT400020206 Potato nucleus 55.56 50.82
CDY23807 Canola nucleus 29.39 24.4
CDY46864 Canola nucleus 29.03 24.25
CDY48943 Canola nucleus 19.35 22.41
CDY29162 Canola nucleus 29.03 21.66
CDY35020 Canola nucleus 13.62 21.59
CDY39913 Canola nucleus 28.67 21.56
CDY44883 Canola mitochondrion, nucleus 22.94 20.91
CDX70198 Canola mitochondrion, nucleus 22.94 20.85
CDY19094 Canola nucleus 23.3 20.44
CDX86512 Canola nucleus 23.3 20.44
CDY06231 Canola nucleus 23.66 20.31
CDY15590 Canola nucleus 23.3 20.25
CDY09952 Canola nucleus 23.66 20.12
CDX80722 Canola nucleus 22.94 19.88
CDY48939 Canola nucleus 21.86 19.74
CDY15560 Canola nucleus 26.16 19.16
CDY15381 Canola nucleus 25.09 18.92
CDY71925 Canola nucleus 17.2 18.9
CDY24896 Canola nucleus 22.94 18.88
CDY10799 Canola nucleus 25.09 18.87
CDX86537 Canola nucleus 26.52 18.83
CDY56611 Canola nucleus 24.73 18.75
CDY30752 Canola nucleus 21.86 18.48
CDY06974 Canola nucleus 22.94 18.18
CDX80717 Canola nucleus, plastid 20.79 18.12
CDY47713 Canola nucleus 25.09 17.86
CDY10170 Canola nucleus 25.09 17.81
CDX93167 Canola nucleus 21.86 17.78
CDY13830 Canola nucleus, plastid 19.35 17.59
CDY23889 Canola nucleus 22.22 17.46
CDX79976 Canola nucleus 21.86 17.13
CDY07597 Canola nucleus 19.35 16.17
CDX82008 Canola nucleus 21.15 15.86
CDY15909 Canola plastid 24.37 15.32
CDY12108 Canola nucleus 23.3 15.26
CDX72732 Canola nucleus 24.01 15.19
CDX99610 Canola nucleus 23.66 14.93
CDY22407 Canola nucleus 23.3 14.61
CDX90298 Canola nucleus 22.58 14.38
CDY70502 Canola nucleus 19.0 13.73
CDY13828 Canola plastid 19.0 13.7
CDX82009 Canola plastid 18.64 13.58
CDY13829 Canola cytosol 0.36 9.09
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1GO:A0A078C2C0EnsemblPlants:CDX71000ProteinID:CDX71000ProteinID:CDX71000.1
ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00140933001InterPro:IPR004827PFAM:PF00170
ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR13301PANTHER:PTHR13301:SF134SMART:SM00338SUPFAM:SSF57959
UniParc:UPI0004EF0410InterPro:bZIPSEG:seg:::
Description
BnaC03g10840D
Coordinates
chrLK031791:+:3146434..3147911
Molecular Weight (calculated)
31354.3 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.820
Length
279 amino acids
Sequence
(BLAST)
001: MAQLPPKIPN MTPHWPDFSS QNLTATASTA VQNPSWVDEF LDFSACRRGN HRRSISDSIA FLEVPFVRGH GSTQNNHFDK FDDEQFMSMF KDDNDLHNNP
101: SHNNNNAGTT GSSSNTSTFQ CKTEPEDGAA SNNNSGDSSV TRILDPKRVK RILANRQSAQ RSRVRKLQYI TELERSVTSL QAEVSVLSPR VAFLDHQRLL
201: LNVDNSSLKQ RIAALAQDKI FKDAHQEALK REIERLREVY QQQSLKKMEN GNHSQATGTG ANSAVDIKPS NEKEELFNV
Best Arabidopsis Sequence Match ( AT2G42380.2 )
(BLAST)
001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S
Arabidopsis Description
BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.