Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030637.1-P | Field mustard | nucleus | 97.11 | 97.11 |
| CDX86537 | Canola | nucleus | 90.55 | 87.79 |
| CDY47713 | Canola | nucleus | 80.31 | 78.06 |
| CDY10170 | Canola | nucleus | 79.53 | 77.1 |
| AT1G06070.1 | Thale cress | nucleus | 85.56 | 77.07 |
| CDY10799 | Canola | nucleus | 66.4 | 68.19 |
| CDY56611 | Canola | nucleus | 65.09 | 67.39 |
| CDY15381 | Canola | nucleus | 65.09 | 67.03 |
| CDY19094 | Canola | nucleus | 54.33 | 65.09 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 71.65 | 64.24 |
| Solyc06g053350.2.1 | Tomato | plastid | 67.45 | 59.22 |
| GSMUA_Achr11P... | Banana | nucleus | 55.12 | 56.15 |
| KRH29611 | Soybean | nucleus | 56.17 | 55.58 |
| KRH24606 | Soybean | nucleus | 56.43 | 54.16 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 53.28 | 53.85 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 50.13 | 53.8 |
| Zm00001d021189_P001 | Maize | nucleus | 52.23 | 53.78 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 52.76 | 53.32 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 52.23 | 52.93 |
| Zm00001d006127_P003 | Maize | nucleus | 50.92 | 52.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.59 | 52.13 |
| Os09t0516200-01 | Rice | nucleus | 51.97 | 52.11 |
| EER99183 | Sorghum | nucleus | 53.54 | 52.04 |
| GSMUA_Achr11P... | Banana | nucleus | 58.79 | 50.0 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 46.98 | 49.04 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 46.19 | 48.22 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 46.19 | 47.57 |
| EES12438 | Sorghum | nucleus | 46.46 | 46.83 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 44.88 | 46.47 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 45.41 | 46.38 |
| Zm00001d003180_P001 | Maize | nucleus | 44.36 | 45.8 |
| Zm00001d031697_P001 | Maize | nucleus | 29.66 | 45.38 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 52.76 | 45.17 |
| EES14151 | Sorghum | nucleus | 44.09 | 43.98 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 43.83 | 43.26 |
| Zm00001d052717_P001 | Maize | nucleus | 43.04 | 42.82 |
| CDX86512 | Canola | nucleus | 33.33 | 39.94 |
| CDY48943 | Canola | nucleus | 25.2 | 39.83 |
| CDY15590 | Canola | nucleus | 33.33 | 39.56 |
| CDY35020 | Canola | nucleus | 18.11 | 39.2 |
| CDY06231 | Canola | nucleus | 32.55 | 38.15 |
| CDY09952 | Canola | nucleus | 32.55 | 37.8 |
| CDX93167 | Canola | nucleus | 33.86 | 37.61 |
| CDY06974 | Canola | nucleus | 34.65 | 37.5 |
| CDY23889 | Canola | nucleus | 34.12 | 36.62 |
| CDX79976 | Canola | nucleus | 33.6 | 35.96 |
| CDX80722 | Canola | nucleus | 29.92 | 35.4 |
| CDY30752 | Canola | nucleus | 28.61 | 33.03 |
| CDY71925 | Canola | nucleus | 21.78 | 32.68 |
| CDY24896 | Canola | nucleus | 28.61 | 32.15 |
| CDY13830 | Canola | nucleus, plastid | 24.67 | 30.62 |
| CDY07597 | Canola | nucleus | 26.51 | 30.24 |
| CDX72732 | Canola | nucleus | 33.33 | 28.8 |
| CDY15909 | Canola | plastid | 33.33 | 28.6 |
| CDY22407 | Canola | nucleus | 33.07 | 28.31 |
| CDY12108 | Canola | nucleus | 31.5 | 28.17 |
| CDX90298 | Canola | nucleus | 32.02 | 27.85 |
| CDX99610 | Canola | nucleus | 32.28 | 27.83 |
| CDX82008 | Canola | nucleus | 26.25 | 26.88 |
| CDY64520 | Canola | nucleus, plastid | 18.9 | 26.37 |
| CDX71000 | Canola | nucleus, plastid | 19.16 | 26.16 |
| CDX79872 | Canola | nucleus, plastid | 19.16 | 26.07 |
| CDY06053 | Canola | nucleus | 19.42 | 26.06 |
| CDX71974 | Canola | nucleus, plastid | 17.85 | 25.47 |
| CDY22561 | Canola | nucleus, plastid | 17.59 | 25.0 |
| CDY56238 | Canola | extracellular | 8.66 | 24.63 |
| CDY35379 | Canola | nucleus, plastid | 17.06 | 24.25 |
| CDX98266 | Canola | nucleus, plastid | 18.9 | 24.16 |
| CDY46864 | Canola | nucleus | 18.37 | 20.96 |
| CDY23807 | Canola | nucleus | 18.37 | 20.83 |
| CDY39913 | Canola | nucleus | 18.9 | 19.41 |
| CDY29162 | Canola | nucleus | 18.9 | 19.25 |
| CDY13828 | Canola | plastid | 18.9 | 18.6 |
| CDX82009 | Canola | plastid | 18.64 | 18.54 |
| CDY70502 | Canola | nucleus | 18.37 | 18.13 |
| CDY48939 | Canola | nucleus | 14.7 | 18.12 |
| CDX80717 | Canola | nucleus, plastid | 14.96 | 17.81 |
| CDY44883 | Canola | mitochondrion, nucleus | 12.86 | 16.01 |
| CDX70198 | Canola | mitochondrion, nucleus | 12.86 | 15.96 |
| CDY13829 | Canola | cytosol | 0.26 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078FMC2 | UniProt:A0A078FMC2 | EnsemblPlants:CDY15560 | ProteinID:CDY15560 |
| ProteinID:CDY15560.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00089737001 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF80 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EEA985 | InterPro:bZIP | SEG:seg |
Description
BnaA08g28440DBnaA08g28440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMC2]
Coordinates
chrLK032055:-:542011..543976
Molecular Weight (calculated)
42456.5 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.875
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKEKPSGLP PPHPPSRYSA FSPNAMKPES SFPHITPSGS SSDANLFSHD ISRMSDNPPK NLGHRRAHSE ILTLPDDLSF DSDLGVVGAA ADGPSFSDDT
101: DEDLLSMYLD MDKFNSSEAS SSQMCEPSEP AWNERPRARH QHSQSMDGTT SIKPEMLMSG TGSNEDAKKA LSAAKLSELA LIDPKRAKRI WANRQSAARS
201: KERKMRYIAE LERKVQTLQT EATSLSAQLT LLQRDTNGLS VENNELKLRV QSMEQQFHLQ DALNEALKEE VQHLKVLTGQ GVSNGASMMS YGGSFGSNQQ
301: FYPNNQSRHT MLAAQQFQQL QIQSQKQQQQ QLHQQQMYQL QQQRIQQHEQ QSGVTELRRP MSSSGLKVSV TSDPEATLTK D
101: DEDLLSMYLD MDKFNSSEAS SSQMCEPSEP AWNERPRARH QHSQSMDGTT SIKPEMLMSG TGSNEDAKKA LSAAKLSELA LIDPKRAKRI WANRQSAARS
201: KERKMRYIAE LERKVQTLQT EATSLSAQLT LLQRDTNGLS VENNELKLRV QSMEQQFHLQ DALNEALKEE VQHLKVLTGQ GVSNGASMMS YGGSFGSNQQ
301: FYPNNQSRHT MLAAQQFQQL QIQSQKQQQQ QLHQQQMYQL QQQRIQQHEQ QSGVTELRRP MSSSGLKVSV TSDPEATLTK D
001: MDKEKSPAPP PSGGLPPPSG RYSAFSPNGS SFAMKAESSF PPLTPSGSNS SDANRFSHDI SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGAAD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
Arabidopsis Description
At1g06070 [Source:UniProtKB/TrEMBL;Acc:Q9LNE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.