Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 73.44 | 82.46 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 54.46 | 68.73 |
| CDY19094 | Canola | nucleus | 43.53 | 61.32 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 51.12 | 60.9 |
| Zm00001d021189_P001 | Maize | nucleus | 50.22 | 60.81 |
| AT2G31370.6 | Thale cress | nucleus | 54.02 | 60.8 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 51.12 | 60.74 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 51.12 | 60.74 |
| GSMUA_Achr11P... | Banana | nucleus | 50.45 | 60.43 |
| Zm00001d006127_P003 | Maize | nucleus | 49.78 | 60.11 |
| CDY15381 | Canola | nucleus | 49.55 | 60.0 |
| Os09t0516200-01 | Rice | nucleus | 50.89 | 60.0 |
| EER99183 | Sorghum | nucleus | 52.23 | 59.69 |
| CDY10799 | Canola | nucleus | 49.33 | 59.57 |
| Bra018250.1-P | Field mustard | nucleus | 49.33 | 59.09 |
| CDY15560 | Canola | nucleus | 50.0 | 58.79 |
| Bra030637.1-P | Field mustard | nucleus | 50.0 | 58.79 |
| CDY10170 | Canola | nucleus | 51.56 | 58.78 |
| CDY56611 | Canola | nucleus | 48.21 | 58.7 |
| CDY47713 | Canola | nucleus | 51.12 | 58.42 |
| Bra015471.1-P | Field mustard | nucleus | 51.12 | 58.42 |
| AT1G06070.1 | Thale cress | nucleus | 55.13 | 58.39 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 54.69 | 57.65 |
| CDX86537 | Canola | nucleus | 50.45 | 57.51 |
| Bra021735.1-P | Field mustard | nucleus | 43.08 | 56.93 |
| KRH10117 | Soybean | nucleus | 53.35 | 56.9 |
| KRH23219 | Soybean | nucleus | 54.24 | 56.78 |
| Solyc06g053350.2.1 | Tomato | plastid | 54.46 | 56.22 |
| KRH29611 | Soybean | nucleus | 45.76 | 53.25 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 42.41 | 52.05 |
| GSMUA_Achr3P19170_001 | Banana | nucleus | 23.21 | 52.0 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 51.56 | 51.91 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 42.86 | 51.89 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 42.19 | 51.78 |
| KRH24606 | Soybean | nucleus | 45.54 | 51.39 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 41.96 | 51.09 |
| EES14151 | Sorghum | nucleus | 42.41 | 49.74 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 41.29 | 49.6 |
| EES12438 | Sorghum | nucleus | 41.74 | 49.47 |
| Zm00001d003180_P001 | Maize | nucleus | 40.62 | 49.32 |
| Zm00001d031697_P001 | Maize | nucleus | 27.01 | 48.59 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 40.62 | 47.15 |
| Zm00001d052717_P001 | Maize | nucleus | 39.96 | 46.74 |
| GSMUA_Achr6P18130_001 | Banana | nucleus | 30.13 | 46.08 |
| GSMUA_Achr6P13040_001 | Banana | nucleus | 27.46 | 43.31 |
| GSMUA_Achr10P... | Banana | nucleus | 29.69 | 42.49 |
| GSMUA_Achr2P18830_001 | Banana | nucleus | 25.89 | 40.28 |
| GSMUA_Achr6P32530_001 | Banana | nucleus | 28.35 | 39.81 |
| GSMUA_Achr11P... | Banana | nucleus | 27.68 | 39.74 |
| GSMUA_Achr10P... | Banana | nucleus | 27.68 | 36.9 |
| GSMUA_Achr5P20200_001 | Banana | nucleus | 22.77 | 36.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.12 | 36.42 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 29.69 | 31.37 |
| GSMUA_Achr5P29650_001 | Banana | nucleus | 26.12 | 30.71 |
| GSMUA_Achr6P26930_001 | Banana | nucleus | 16.74 | 29.64 |
| GSMUA_Achr9P06540_001 | Banana | nucleus | 16.07 | 29.51 |
| GSMUA_Achr3P12290_001 | Banana | nucleus | 32.14 | 28.8 |
| GSMUA_Achr3P03550_001 | Banana | nucleus | 14.73 | 28.45 |
| GSMUA_Achr3P31390_001 | Banana | nucleus | 14.06 | 28.25 |
| GSMUA_Achr8P12090_001 | Banana | nucleus | 29.46 | 27.91 |
| GSMUA_Achr1P08090_001 | Banana | nucleus, plastid | 29.02 | 27.9 |
| GSMUA_Achr4P10560_001 | Banana | nucleus | 15.62 | 25.83 |
| GSMUA_Achr7P25310_001 | Banana | nucleus | 15.85 | 25.72 |
| GSMUA_Achr8P29390_001 | Banana | nucleus | 15.62 | 19.13 |
| GSMUA_Achr9P00300_001 | Banana | nucleus | 15.62 | 18.62 |
| GSMUA_Achr3P02820_001 | Banana | golgi | 14.51 | 16.21 |
| GSMUA_Achr10P... | Banana | nucleus | 10.94 | 14.98 |
| GSMUA_Achr3P19190_001 | Banana | nucleus | 10.94 | 14.37 |
| GSMUA_Achr5P17400_001 | Banana | nucleus | 10.71 | 12.4 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G14990_001 | EnsemblPlants:GSMUA_Achr11P14990_001 | EnsemblPlants:GSMUA_Achr11T14990_001 | InterPro:IPR004827 |
| UniProt:M0RSC9 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF79 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI000295950B | InterPro:bZIP | SEG:seg | : | : |
Description
Probable transcription factor PosF21 [Source:GMGC_GENE;Acc:GSMUA_Achr11G14990_001]
Coordinates
chr11:+:16481721..16491726
Molecular Weight (calculated)
48767.8 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.815
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKDKSPASG GGGGGSGGGF PSHSSRYAPF GSSSGSFGFI GDHPSASSSS QPPPDSGQFG HATRSDAERF SYDVSRMPDF PPRNPGHRRA HSEILSLPDD
101: ISFDGDLGVV GSYDGPSLSD ETEEDLVSMY MDVEKFSSGA TSSGLSIGES SLPVLSPVQA PSEGENVAFG STERPRIRHQ HSQSLDGSTA IKPELLMSGG
201: EGPSSVEAKK AMSAAKLAEL ALVDPKRAKR ILANRQSAAR SKERKMRYIA ELERKVQTLQ TEATTLSAQL TMLQRDTNGL TVENNELKLR LQTMEQQVHL
301: QDALNEALRE EVQRLKLATG QMLPNGGQMV NLVPSSFGAN QQFYHHNQGM QSLLAAHQLQ QLQIHSQHPQ QLQQQPQQQQ PLHSQTPQHQ QQPQPHQTQQ
401: QPQQQQALHP LTLQQQRQPP AADLRLKGPL TSQNQLGEMA SDEQNAHE
101: ISFDGDLGVV GSYDGPSLSD ETEEDLVSMY MDVEKFSSGA TSSGLSIGES SLPVLSPVQA PSEGENVAFG STERPRIRHQ HSQSLDGSTA IKPELLMSGG
201: EGPSSVEAKK AMSAAKLAEL ALVDPKRAKR ILANRQSAAR SKERKMRYIA ELERKVQTLQ TEATTLSAQL TMLQRDTNGL TVENNELKLR LQTMEQQVHL
301: QDALNEALRE EVQRLKLATG QMLPNGGQMV NLVPSSFGAN QQFYHHNQGM QSLLAAHQLQ QLQIHSQHPQ QLQQQPQQQQ PLHSQTPQHQ QQPQPHQTQQ
401: QPQQQQALHP LTLQQQRQPP AADLRLKGPL TSQNQLGEMA SDEQNAHE
001: MDKEKSPAPP PSGGLPPPSG RYSAFSPNGS SFAMKAESSF PPLTPSGSNS SDANRFSHDI SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGAAD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
Arabidopsis Description
At1g06070 [Source:UniProtKB/TrEMBL;Acc:Q9LNE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.