Factsheet for HORVU5Hr1G079160.11

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
mitochondrion 1
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	secretory
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G308600.1	Wheat	nucleus	82.25	97.34
TraesCS5B01G301900.1	Wheat	nucleus	82.25	97.08
TraesCS5A01G299400.1	Wheat	nucleus	82.25	97.08
Os09t0516200-01	Rice	nucleus	68.54	80.26
Zm00001d006127_P003	Maize	nucleus	64.94	77.9
Zm00001d021189_P001	Maize	nucleus	64.72	77.84
EER99183	Sorghum	nucleus	68.31	77.55
HORVU3Hr1G109890.1	Barley	cytosol	8.54	61.29
HORVU7Hr1G056230.2	Barley	nucleus	46.29	56.44
CDY56611	Canola	nucleus	45.39	54.89
CDY10799	Canola	nucleus	44.72	53.64
Bra018250.1-P	Field mustard	nucleus	44.72	53.21
CDY10170	Canola	nucleus	46.97	53.18
CDY47713	Canola	nucleus	46.74	53.06
Bra015471.1-P	Field mustard	nucleus	46.74	53.06
CDY19094	Canola	nucleus	37.75	52.83
CDY15560	Canola	nucleus	45.17	52.76
Bra030637.1-P	Field mustard	nucleus	45.17	52.76
GSMUA_Achr11P...	Banana	nucleus	44.27	52.67
GSMUA_AchrUn_...	Banana	nucleus	46.74	52.13
CDY15381	Canola	nucleus	43.15	51.89
GSMUA_Achr11P...	Banana	nucleus	51.91	51.56
AT2G31370.6	Thale cress	nucleus	46.07	51.51
VIT_05s0102g01120.t01	Wine grape	nucleus	48.76	51.06
CDX86537	Canola	nucleus	44.94	50.89
KRH10117	Soybean	nucleus	47.42	50.24
AT1G06070.1	Thale cress	nucleus	47.19	49.65
KRH23219	Soybean	nucleus	47.64	49.53
GSMUA_Achr5P25700_001	Banana	nucleus	39.33	49.3
Bra021735.1-P	Field mustard	nucleus	37.53	49.26
Solyc06g053350.2.1	Tomato	plastid	47.87	49.08
KRH24606	Soybean	nucleus	42.92	48.11
KRH29611	Soybean	nucleus	40.9	47.27
HORVU2Hr1G085560.4	Barley	nucleus, plastid	39.33	45.34
HORVU4Hr1G020540.1	Barley	nucleus	29.66	40.87
HORVU5Hr1G039870.5	Barley	nucleus, plastid	30.34	37.82
HORVU4Hr1G050190.1	Barley	nucleus	30.11	37.75
HORVU4Hr1G083000.1	Barley	nucleus	26.74	30.51
HORVU4Hr1G053410.2	Barley	cytosol	25.39	29.74
HORVU2Hr1G017820.1	Barley	nucleus	24.04	29.23
HORVU5Hr1G045690.1	Barley	nucleus	15.73	29.17
HORVU7Hr1G056490.1	Barley	nucleus, plastid	31.91	27.52
HORVU3Hr1G072770.1	Barley	nucleus	15.96	26.69
HORVU3Hr1G040920.8	Barley	nucleus	15.96	22.68
HORVU5Hr1G080140.1	Barley	nucleus, plastid	19.55	18.87
HORVU1Hr1G049310.2	Barley	nucleus	17.53	18.18
HORVU5Hr1G031130.2	Barley	mitochondrion	13.48	16.67
HORVU4Hr1G016340.4	Barley	nucleus, plastid	15.06	16.26
HORVU6Hr1G051110.4	Barley	nucleus	10.11	13.98

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287RXX0	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU5Hr1G079160	EnsemblPlants:HORVU5Hr1G079160.11	InterPro:IPR004827	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690
PANTHER:PTHR13690:SF80	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B47CAAD	InterPro:bZIP	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:556387595..556391793

Molecular Weight (calculated)

48431.4 Da

IEP (calculated)

8.515

GRAVY (calculated)

-0.680

Length

445 amino acids

Sequence
(BLAST)

001: AQTTLASRSH SLSLPLLSIV FFLRPGSEIF LPLFPRKNFH PISALCLISS VDLQKGGAFE EIRRGPGAGK MNKDRSRISA DGGGDGLPPQ SSRRSATPPP
101: EYDISRMPDF PTRNPGHRRA HSEILSLPDD LDLCAPGGGD GPSLSDENDE ELFSMFLDVD KLNSSCGPSS DQAESSSAAA AGGGEAARAG HVMRPKHQHS
201: QSMDESMSIK AEDLVGAPGM DGMSTVEAKK AVSAAKLAEL ALVDPKRAKR IWANRQSAAR SKERKMRYIG ELERKVQTLQ TEATTLSAQL SLLQRDTSGL
301: TSENGELKLR LQNMEQQVHL QDALNDTLKT EVQRLKVATG QMGNGGGMLM NYGGMSQAPH QFGGNQQMFH NNQSMQSLLA THQLQQLQLH QQPQQQQQPM
401: RPQHHHHQQQ PLHPLQAQQF QQAARDLKMK GPMWGDGKSS GGGGI

Best Arabidopsis Sequence Match ( AT1G06070.1 )
(BLAST)

001: MDKEKSPAPP PSGGLPPPSG RYSAFSPNGS SFAMKAESSF PPLTPSGSNS SDANRFSHDI SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGAAD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD

Arabidopsis Description

At1g06070 [Source:UniProtKB/TrEMBL;Acc:Q9LNE0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.