Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0211800-01 | Rice | extracellular, nucleus | 85.3 | 80.91 |
| TraesCS3D01G148200.1 | Wheat | nucleus | 77.32 | 79.34 |
| TraesCS3B01G167500.1 | Wheat | nucleus | 72.84 | 78.08 |
| TraesCS2D01G144300.1 | Wheat | nucleus | 75.72 | 77.45 |
| TraesCS2B01G165700.1 | Wheat | nucleus | 75.72 | 77.2 |
| TraesCS2A01G140900.1 | Wheat | nucleus | 74.12 | 75.82 |
| TraesCS3A01G131900.1 | Wheat | nucleus | 74.76 | 73.58 |
| Zm00001d039383_P001 | Maize | nucleus | 62.62 | 68.06 |
| GSMUA_Achr6P26930_001 | Banana | nucleus | 49.2 | 60.87 |
| GSMUA_Achr9P06540_001 | Banana | nucleus | 46.65 | 59.84 |
| HORVU3Hr1G072770.1 | Barley | nucleus | 43.77 | 51.5 |
| HORVU5Hr1G045690.1 | Barley | nucleus | 39.3 | 51.25 |
| EES00074 | Sorghum | nucleus, plastid | 67.09 | 50.97 |
| VIT_19s0014g01780.t01 | Wine grape | nucleus | 46.65 | 47.25 |
| KRH22014 | Soybean | nucleus, plastid | 48.24 | 47.19 |
| KRH27307 | Soybean | plastid | 42.49 | 46.67 |
| Solyc07g062710.2.1 | Tomato | nucleus, plastid | 40.89 | 42.38 |
| PGSC0003DMT400032381 | Potato | nucleus, plastid | 38.98 | 42.21 |
| HORVU3Hr1G109890.1 | Barley | cytosol | 5.75 | 29.03 |
| HORVU5Hr1G031130.2 | Barley | mitochondrion | 24.6 | 21.39 |
| HORVU6Hr1G051110.4 | Barley | nucleus | 21.09 | 20.5 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 24.6 | 18.69 |
| HORVU4Hr1G050190.1 | Barley | nucleus | 21.09 | 18.59 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 21.41 | 18.36 |
| HORVU4Hr1G020540.1 | Barley | nucleus | 18.53 | 17.96 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 21.41 | 17.36 |
| HORVU5Hr1G039870.5 | Barley | nucleus, plastid | 18.53 | 16.25 |
| HORVU4Hr1G083000.1 | Barley | nucleus | 20.13 | 16.15 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 22.68 | 15.96 |
| HORVU4Hr1G053410.2 | Barley | cytosol | 17.89 | 14.74 |
| HORVU7Hr1G056490.1 | Barley | nucleus, plastid | 23.96 | 14.53 |
| HORVU5Hr1G080140.1 | Barley | nucleus, plastid | 18.21 | 12.36 |
| HORVU2Hr1G017820.1 | Barley | nucleus | 14.06 | 12.02 |
| HORVU1Hr1G049310.2 | Barley | nucleus | 15.65 | 11.42 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A287KV44 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G040920 |
| EnsemblPlants:HORVU3Hr1G040920.8 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR13301 |
| PANTHER:PTHR13301:SF134 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000B48209F | InterPro:bZIP | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:-:253811354..253812658
Molecular Weight (calculated)
34046.7 Da
IEP (calculated)
8.573
GRAVY (calculated)
-0.845
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQLPPKIPT MAPAWPEFGG GHHHSAHARH HHHQRSPSMG AFLAAPMPPL PPPAPANAGA QQPSWVDEFL DFSAAKRGAH RRTVSDSVAF LDDSNAGGGA
101: HEFDRLDDDQ LMSMFSDELA PQRQAQAASA SSPSDHNSIN DEKQDKGDTE EAQSHCNGDG AAPGQPSSPA TVDPKRVKRI LANRQSAQRS RVRKLQYISE
201: LERSVTSLQT EVSALSPRVA FLDHQRSLLT LGNSHLKQRI AALAQDKIFK DGGTEEGDRE AEANLPAAEP QERGTPGRRR RPPGPGRQQR LDRQRGDRRG
301: LPALVIEIRP VGL
101: HEFDRLDDDQ LMSMFSDELA PQRQAQAASA SSPSDHNSIN DEKQDKGDTE EAQSHCNGDG AAPGQPSSPA TVDPKRVKRI LANRQSAQRS RVRKLQYISE
201: LERSVTSLQT EVSALSPRVA FLDHQRSLLT LGNSHLKQRI AALAQDKIFK DGGTEEGDRE AEANLPAAEP QERGTPGRRR RPPGPGRQQR LDRQRGDRRG
301: LPALVIEIRP VGL
001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV
Arabidopsis Description
BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.