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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 6
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032381 Potato nucleus, plastid 92.72 96.89
GSMUA_Achr9P06540_001 Banana nucleus 47.68 59.02
GSMUA_Achr6P26930_001 Banana nucleus 49.34 58.89
KRH27307 Soybean plastid 53.64 56.84
GSMUA_Achr3P03550_001 Banana nucleus 43.38 56.47
VIT_19s0014g01780.t01 Wine grape nucleus 57.28 55.99
GSMUA_Achr3P31390_001 Banana nucleus 40.4 54.71
TraesCS5B01G142200.1 Wheat nucleus 42.72 53.97
TraesCS5D01G148700.1 Wheat nucleus 42.72 53.97
HORVU5Hr1G045690.1 Barley nucleus 42.72 53.75
KRH22014 Soybean nucleus, plastid 56.95 53.75
TraesCS5A01G143300.1 Wheat nucleus 42.38 53.56
Zm00001d016154_P001 Maize nucleus 43.38 51.98
Os01t0756200-01 Rice nucleus 45.36 51.7
HORVU3Hr1G072770.1 Barley nucleus 45.36 51.5
EES01493 Sorghum nucleus 47.02 51.45
GSMUA_Achr7P25310_001 Banana nucleus 47.02 51.45
Zm00001d039383_P001 Maize nucleus 49.01 51.39
TraesCS3D01G293500.1 Wheat nucleus 45.36 51.12
TraesCS3B01G328400.1 Wheat nucleus 45.36 51.12
Zm00001d043420_P001 Maize nucleus 47.02 51.08
Solyc07g053450.2.1 Tomato nucleus 48.01 51.06
EES04836 Sorghum nucleus 43.38 50.58
Solyc12g010800.1.1 Tomato nucleus 50.99 50.33
Zm00001d053442_P001 Maize nucleus 42.72 50.0
Zm00001d012719_P001 Maize nucleus 45.03 48.57
GSMUA_Achr4P10560_001 Banana nucleus 43.38 48.34
TraesCS2D01G144300.1 Wheat nucleus 48.01 47.39
TraesCS2A01G140900.1 Wheat nucleus 47.02 46.41
TraesCS3B01G167500.1 Wheat nucleus 44.7 46.23
TraesCS3A01G293700.2 Wheat nucleus 45.36 45.97
TraesCS3D01G148200.1 Wheat nucleus 46.36 45.9
TraesCS2B01G165700.1 Wheat nucleus 45.7 44.95
HORVU3Hr1G040920.8 Barley nucleus 42.38 40.89
Os01t0211800-01 Rice extracellular, nucleus 44.04 40.3
TraesCS3A01G131900.1 Wheat nucleus 41.72 39.62
EES00074 Sorghum nucleus, plastid 50.99 37.38
Solyc06g060490.2.1 Tomato nucleus 20.53 22.38
Solyc11g020950.1.1 Tomato nucleus 23.51 21.78
Solyc11g006490.1.1 Tomato nucleus 21.85 21.5
Solyc06g049040.2.1 Tomato nucleus 22.52 20.54
Solyc06g048630.2.1 Tomato nucleus 23.18 20.06
Solyc04g071160.2.1 Tomato nucleus 22.52 19.94
Solyc10g044830.1.1 Tomato nucleus 15.56 19.03
Solyc06g053350.2.1 Tomato plastid 23.84 16.59
Solyc04g081190.2.1 Tomato nucleus 24.17 16.44
Solyc01g110480.2.1 Tomato nucleus 26.82 13.92
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1ncoils:CoilGO:GO:0000977GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045893InterPro:IPR004827UniProt:K4CGV4PFAM:PF00170ScanProsite:PS00036
PFscan:PS50217PANTHER:PTHR13301PANTHER:PTHR13301:SF134SMART:SM00338SUPFAM:SSF57959EnsemblPlantsGene:Solyc07g062710.2
EnsemblPlants:Solyc07g062710.2.1UniParc:UPI000276B84CInterPro:bZIPSEG:seg::
Description
No Description!
Coordinates
chr7:-:65395090..65396959
Molecular Weight (calculated)
33592.0 Da
IEP (calculated)
5.920
GRAVY (calculated)
-0.788
Length
302 amino acids
Sequence
(BLAST)
001: MAQLPPKVPT MAHNWPFQNM PPLPNSSTIV SNHHTTNSWV DDFLDFSSSR RNSHRRSVSD PIAFVEAPFL QQCRGNGLSN GFDKLDDELL TTMFSDDSGA
101: GAAFAGTAPC SNPSSTNPST PSDQVSENED QKSPVRLEVN LVVQPKNEPG EDDSDNQSPV TSKNPVNDSS DNNNNNSIVD PKRIKRILAN RQSAQRSRVR
201: KLQYISELER SVTTLQTEVS ALSPRVAFLD HQRLLLNVDN SALRQRIAAL AQDKIFKDAH QEALKKEIER LRQIYHEQNM KKMNTADEPP STAAPMSCTE
301: EA
Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)
001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV
Arabidopsis Description
BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.