Factsheet for TraesCS3A01G131900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G148200.1	Wheat	nucleus	76.73	80.0
TraesCS3B01G167500.1	Wheat	nucleus	70.44	76.71
HORVU3Hr1G040920.8	Barley	nucleus	73.58	74.76
TraesCS2A01G140900.1	Wheat	nucleus	70.13	72.88
Os01t0211800-01	Rice	extracellular, nucleus	69.18	66.67
Zm00001d039383_P001	Maize	nucleus	60.06	66.32
GSMUA_Achr6P26930_001	Banana	nucleus	46.23	58.1
GSMUA_Achr9P06540_001	Banana	nucleus	44.03	57.38
TraesCS5A01G143300.1	Wheat	nucleus	37.42	49.79
EES00074	Sorghum	nucleus, plastid	64.47	49.76
VIT_19s0014g01780.t01	Wine grape	nucleus	44.65	45.95
KRH22014	Soybean	nucleus, plastid	45.91	45.62
KRH27307	Soybean	plastid	40.57	45.26
TraesCS3A01G293700.2	Wheat	nucleus	41.2	43.96
Solyc07g062710.2.1	Tomato	nucleus, plastid	39.62	41.72
PGSC0003DMT400032381	Potato	nucleus, plastid	37.11	40.83
TraesCS4A01G204300.1	Wheat	nucleus	25.16	23.12
TraesCS6A01G203200.1	Wheat	nucleus	19.81	19.5
TraesCS4A01G135600.2	Wheat	nucleus	21.07	18.82
TraesCS5A01G491600.1	Wheat	nucleus	15.09	18.75
TraesCS5A01G299400.1	Wheat	nucleus	22.01	18.57
TraesCS2A01G105700.1	Wheat	nucleus, plastid	21.38	18.48
TraesCS7A01G266400.1	Wheat	nucleus	20.44	17.81
TraesCS2A01G352100.1	Wheat	nucleus	20.75	17.69
TraesCS1A01G186000.1	Wheat	plastid	21.38	17.39
TraesCS5A01G124600.1	Wheat	nucleus	16.98	16.27
TraesCS4A01G209900.1	Wheat	nucleus	16.67	16.01
TraesCS7A01G268700.1	Wheat	nucleus	22.64	15.42
TraesCS5A01G308400.1	Wheat	nucleus	18.24	11.37

Protein Annotations

EnsemblPlants:TraesCS3A01G131900.1	EnsemblPlantsGene:TraesCS3A01G131900	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	PANTHER:PTHR13301	PANTHER:PTHR13301:SF134	PFAM:PF00170	ScanProsite:PS00036	SEG:seg
SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:	:

Description

No Description!

Coordinates

chr3A:+:108729728..108730771

Molecular Weight (calculated)

35013.9 Da

IEP (calculated)

7.571

GRAVY (calculated)

-0.648

Length

318 amino acids

Sequence
(BLAST)

001: MAQLPPKVPA MAPAWPEFGD GHHHSAHAHA RHHHHQRSPS MGAFLAAPMP PLPPANGGVQ QQPSWVDEFL DFSAAKRGAH RRTVSDSVAF LDDGNAGGVG
101: AHEFDRLDDD QLMCMFSDEL APQRQAASAS SPSDHNSVND EKQDRGDAEE AQSDCNGDDG AAPGQPSSPA TADPKRVKRI LANRQSAQRS RVRKLHYISE
201: LERSVTSLQV RRTVHISSLV SSPPKKNAMN LTSNPYVLPV EQTEVSALSP RVAFLDHQRS LLTLGNSHLK QRIAALAQDK IFKDGDRHCH PSQLLLFRNF
301: SPATFRIQFE TIYNRFAD

Best Arabidopsis Sequence Match ( AT3G58120.2 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD GNFLF

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.