Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G316900.1 | Wheat | nucleus | 94.53 | 93.44 |
| TraesCS4B01G320400.1 | Wheat | nucleus | 95.7 | 61.25 |
| HORVU4Hr1G083000.1 | Barley | nucleus | 92.19 | 60.51 |
| VIT_18s0001g13740.t01 | Wine grape | nucleus | 29.69 | 57.58 |
| Zm00001d048455_P001 | Maize | nucleus | 64.45 | 48.96 |
| TraesCS1A01G186000.1 | Wheat | plastid | 67.58 | 44.25 |
| KXG40277 | Sorghum | nucleus | 74.22 | 44.08 |
| Os03t0127500-00 | Rice | nucleus | 72.27 | 43.43 |
| Zm00001d027461_P001 | Maize | plastid | 70.31 | 42.25 |
| GSMUA_Achr1P08090_001 | Banana | nucleus, plastid | 57.03 | 31.33 |
| TraesCS7A01G268700.1 | Wheat | nucleus | 55.86 | 30.62 |
| TraesCS5A01G124600.1 | Wheat | nucleus | 37.89 | 29.22 |
| TraesCS4A01G209900.1 | Wheat | nucleus | 36.33 | 28.1 |
| PGSC0003DMT400009538 | Potato | nucleus | 47.27 | 27.25 |
| TraesCS4A01G135600.2 | Wheat | nucleus | 37.89 | 27.25 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 39.45 | 27.08 |
| Solyc04g081190.2.1 | Tomato | nucleus | 46.88 | 27.03 |
| CDY15909 | Canola | plastid | 46.88 | 27.03 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 39.06 | 26.53 |
| CDX99610 | Canola | nucleus | 45.31 | 26.24 |
| Bra030314.1-P | Field mustard | plastid | 46.48 | 25.87 |
| TraesCS2A01G105700.1 | Wheat | nucleus, plastid | 37.11 | 25.82 |
| KRH61066 | Soybean | nucleus, plastid | 50.78 | 25.34 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 35.55 | 24.93 |
| CDX82008 | Canola | nucleus | 35.94 | 24.73 |
| Bra031172.1-P | Field mustard | nucleus | 35.94 | 24.47 |
| AT2G21230.3 | Thale cress | nucleus | 46.09 | 22.48 |
| KRH05913 | Soybean | nucleus | 48.05 | 22.24 |
| KRH17396 | Soybean | nucleus | 47.27 | 21.65 |
| TraesCS5A01G143300.1 | Wheat | nucleus | 19.92 | 21.34 |
| TraesCS5A01G308400.1 | Wheat | nucleus | 36.72 | 18.43 |
| TraesCS3A01G293700.2 | Wheat | nucleus | 20.7 | 17.79 |
| TraesCS2A01G140900.1 | Wheat | nucleus | 20.31 | 16.99 |
| KRH51734 | Soybean | nucleus | 24.61 | 15.71 |
| TraesCS3A01G131900.1 | Wheat | nucleus | 18.75 | 15.09 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 16.8 | 12.43 |
| TraesCS6A01G203200.1 | Wheat | nucleus | 13.28 | 10.53 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G491600.1 | EnsemblPlantsGene:TraesCS5A01G491600 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF88 | PFAM:PF00170 | PFscan:PS50217 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14703 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr5A:-:660441472..660443148
Molecular Weight (calculated)
28140.2 Da
IEP (calculated)
6.534
GRAVY (calculated)
-0.639
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVLNSSSPD SSAKADSSEN GDSEEWVGAG VKRSAAGEPA MAGRHARSLS VDSLMGRFNF ASPGGAGGMF SLEFGSGEFS PAEMKKIMAD EKLAEMALAD
101: PKRVKRVLAN RQSAARSKER KMRYIVELEQ KVQILQTEAT TLAAQINLLQ RDSSAVATQN NELRFRLQAM EQQAQLRDAL NEALTGEVQR LKIATIELGI
201: GDSCSSNGMA QQHNLMFQQQ QLLQQATPIP FYQLQHQQQQ QQQQQNGTAS KHESRE
101: PKRVKRVLAN RQSAARSKER KMRYIVELEQ KVQILQTEAT TLAAQINLLQ RDSSAVATQN NELRFRLQAM EQQAQLRDAL NEALTGEVQR LKIATIELGI
201: GDSCSSNGMA QQHNLMFQQQ QLLQQATPIP FYQLQHQQQQ QQQQQNGTAS KHESRE
001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.