Factsheet for TraesCS2A01G140900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G144300.1	Wheat	nucleus	94.12	94.12
TraesCS2B01G165700.1	Wheat	nucleus	92.48	92.18
HORVU3Hr1G040920.8	Barley	nucleus	75.82	74.12
Zm00001d039383_P001	Maize	nucleus	68.63	72.92
TraesCS3A01G131900.1	Wheat	nucleus	72.88	70.13
GSMUA_Achr6P26930_001	Banana	nucleus	54.58	66.01
GSMUA_Achr9P06540_001	Banana	nucleus	52.61	65.98
Os01t0211800-01	Rice	extracellular, nucleus	70.26	65.15
TraesCS5A01G143300.1	Wheat	nucleus	43.14	55.23
EES00074	Sorghum	nucleus, plastid	71.9	53.4
KRH27307	Soybean	plastid	48.04	51.58
KRH22014	Soybean	nucleus, plastid	53.59	51.25
VIT_19s0014g01780.t01	Wine grape	nucleus	51.63	51.13
TraesCS3A01G293700.2	Wheat	nucleus	47.39	48.66
Solyc07g062710.2.1	Tomato	nucleus, plastid	46.41	47.02
PGSC0003DMT400032381	Potato	nucleus, plastid	43.79	46.37
TraesCS4A01G204300.1	Wheat	nucleus	27.45	24.28
TraesCS6A01G203200.1	Wheat	nucleus	23.53	22.29
TraesCS4A01G135600.2	Wheat	nucleus	23.86	20.51
TraesCS5A01G491600.1	Wheat	nucleus	16.99	20.31
TraesCS2A01G105700.1	Wheat	nucleus, plastid	23.86	19.84
TraesCS7A01G266400.1	Wheat	nucleus	23.53	19.73
TraesCS5A01G299400.1	Wheat	nucleus	24.18	19.63
TraesCS5A01G124600.1	Wheat	nucleus	20.59	18.98
TraesCS4A01G209900.1	Wheat	nucleus	20.26	18.73
TraesCS1A01G186000.1	Wheat	plastid	23.86	18.67
TraesCS2A01G352100.1	Wheat	nucleus	21.9	17.96
TraesCS7A01G268700.1	Wheat	nucleus	25.49	16.7
TraesCS5A01G308400.1	Wheat	nucleus	22.22	13.33

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF07716	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF134	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS2A01G140900	EnsemblPlants:TraesCS2A01G140900.1	InterPro:bZIP	TIGR:cd14703	SEG:seg

Description

No Description!

Coordinates

chr2A:-:86270391..86271628

Molecular Weight (calculated)

33243.5 Da

IEP (calculated)

6.578

GRAVY (calculated)

-0.755

Length

306 amino acids

Sequence
(BLAST)

001: MAQLPPKIPT MAPAWPEFGG GHHHSAHARH NHHQRSPSTG ASLAESMPPL PPPVPASGDG AQQQPSWVDE FLDFSAAKRG AHRRTVSDSI AFLDDSNAAI
101: GENELDRLDD NQLMSIFSDE LAPQRQAQAA SASSPSDHNS INDGKQDKGD TEEAQSECNG DGAAPGQLSS PATVDPKWVK RILANRQSAQ RSRVRKLQYI
201: SELERSVTSL QTEVSALSPR VAFLDHQRSL LTLGNSHLKQ RIAALARDKI FKDAHQEALK KEIERLRQIY QQQSLRNVEP PAHDDGPLAR SDNNGLIAGE
301: GTAAPS

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.