Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 89.81 | 86.79 |
| EES12438 | Sorghum | nucleus | 69.44 | 68.52 |
| Zm00001d003180_P001 | Maize | nucleus | 66.76 | 67.48 |
| Bra018250.1-P | Field mustard | nucleus | 46.92 | 46.79 |
| CDY10799 | Canola | nucleus | 46.38 | 46.63 |
| CDY56611 | Canola | nucleus | 45.58 | 46.2 |
| Bra015471.1-P | Field mustard | nucleus | 48.53 | 46.17 |
| CDY47713 | Canola | nucleus | 48.53 | 46.17 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 46.65 | 46.15 |
| GSMUA_Achr11P... | Banana | nucleus | 46.11 | 45.99 |
| Bra030637.1-P | Field mustard | nucleus | 46.92 | 45.93 |
| CDY19094 | Canola | nucleus | 38.87 | 45.6 |
| CDY10170 | Canola | nucleus | 47.99 | 45.55 |
| CDY15560 | Canola | nucleus | 46.38 | 45.41 |
| CDY15381 | Canola | nucleus | 44.77 | 45.14 |
| KRH29611 | Soybean | nucleus | 46.38 | 44.94 |
| CDX86537 | Canola | nucleus | 46.92 | 44.53 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 43.43 | 44.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.45 | 44.36 |
| KRH10117 | Soybean | nucleus | 49.6 | 44.05 |
| AT1G06070.1 | Thale cress | nucleus | 49.87 | 43.97 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 49.87 | 43.76 |
| AT2G31370.6 | Thale cress | nucleus | 46.65 | 43.72 |
| KRH23219 | Soybean | nucleus | 49.87 | 43.46 |
| KRH24606 | Soybean | nucleus | 46.11 | 43.32 |
| Solyc06g053350.2.1 | Tomato | plastid | 50.4 | 43.32 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 41.02 | 43.1 |
| Bra021735.1-P | Field mustard | nucleus | 38.87 | 42.77 |
| GSMUA_Achr11P... | Banana | nucleus | 49.6 | 41.29 |
| TraesCS5A01G491600.1 | Wheat | nucleus | 27.08 | 39.45 |
| TraesCS5A01G124600.1 | Wheat | nucleus | 34.85 | 39.16 |
| TraesCS4A01G209900.1 | Wheat | nucleus | 33.78 | 38.07 |
| TraesCS2A01G105700.1 | Wheat | nucleus, plastid | 33.24 | 33.7 |
| TraesCS4A01G135600.2 | Wheat | nucleus | 31.9 | 33.43 |
| TraesCS1A01G186000.1 | Wheat | plastid | 31.9 | 30.43 |
| TraesCS5A01G143300.1 | Wheat | nucleus | 17.43 | 27.2 |
| TraesCS7A01G268700.1 | Wheat | nucleus | 31.9 | 25.48 |
| TraesCS3A01G293700.2 | Wheat | nucleus | 17.69 | 22.15 |
| TraesCS2A01G140900.1 | Wheat | nucleus | 17.96 | 21.9 |
| TraesCS3A01G131900.1 | Wheat | nucleus | 17.69 | 20.75 |
| TraesCS5A01G308400.1 | Wheat | nucleus | 24.4 | 17.84 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 16.09 | 17.34 |
| TraesCS6A01G203200.1 | Wheat | nucleus | 12.33 | 14.24 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G352100.1 | EnsemblPlantsGene:TraesCS2A01G352100 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF79 | PFAM:PF00170 | PFscan:PS50217 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14703 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr2A:-:592693993..592698060
Molecular Weight (calculated)
39907.5 Da
IEP (calculated)
6.059
GRAVY (calculated)
-0.755
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAPPASTSA SAAGSASDAA AEAAPRRPAG HRRAQSEILL GASALPDDLT FDADLGVVGE GGGSGGGGDE DDEDEYEEDE EVGGGGSGGS RMFEMFLQAG
101: GRLSEPLDPS PYPQPPPPAR PRHQHSMSMD GSTSFGSASS GVSGRHGADA KKAISDAKLA ELALVDPKRA KRIMANRQSA ARSKERKMRY IAELERKVQC
201: LQTEATTLSA QLSLLQRDTS GLTNENGDLK LQVQTMEQQV RLQDALNDRL RDEVQQLKIA TGQLNANNGS LGNFGGLSSY GVNPQSYQRS QMQQQSLLAA
301: QHLQQLQIHS QHQQPQMHLQ QQRLGSVRQQ QQSQLRPEAL PFPGDLKMKG IAMTAHVQNA GPSPFDGRAR SEP
101: GRLSEPLDPS PYPQPPPPAR PRHQHSMSMD GSTSFGSASS GVSGRHGADA KKAISDAKLA ELALVDPKRA KRIMANRQSA ARSKERKMRY IAELERKVQC
201: LQTEATTLSA QLSLLQRDTS GLTNENGDLK LQVQTMEQQV RLQDALNDRL RDEVQQLKIA TGQLNANNGS LGNFGGLSSY GVNPQSYQRS QMQQQSLLAA
301: QHLQQLQIHS QHQQPQMHLQ QQRLGSVRQQ QQSQLRPEAL PFPGDLKMKG IAMTAHVQNA GPSPFDGRAR SEP
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
Arabidopsis Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.