Factsheet for TraesCS2A01G105700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G105400.1	Wheat	nucleus	98.64	98.64
TraesCS2B01G122700.1	Wheat	nucleus	98.37	97.84
Zm00001d022442_P001	Maize	nucleus	77.45	76.2
OQU90478	Sorghum	nucleus	77.72	75.66
Zm00001d007172_P001	Maize	plastid	73.91	75.14
HORVU2Hr1G017820.1	Barley	nucleus	69.02	69.4
TraesCS4A01G135600.2	Wheat	nucleus	63.32	65.45
GSMUA_Achr2P18830_001	Banana	nucleus	48.64	62.15
GSMUA_Achr6P32530_001	Banana	nucleus	46.47	53.6
Bra000195.1-P	Field mustard	nucleus	35.87	39.52
TraesCS5A01G491600.1	Wheat	nucleus	25.82	37.11
TraesCS5A01G299400.1	Wheat	nucleus	36.68	35.81
TraesCS7A01G266400.1	Wheat	nucleus	34.51	34.79
TraesCS4A01G209900.1	Wheat	nucleus	30.98	34.44
TraesCS5A01G124600.1	Wheat	nucleus	30.98	34.34
TraesCS2A01G352100.1	Wheat	nucleus	33.7	33.24
TraesCS1A01G186000.1	Wheat	plastid	29.89	28.13
CDY13830	Canola	nucleus, plastid	22.83	27.36
TraesCS5A01G143300.1	Wheat	nucleus	17.66	27.2
TraesCS7A01G268700.1	Wheat	nucleus	33.15	26.12
TraesCS3A01G293700.2	Wheat	nucleus	20.38	25.17
KRH35159	Soybean	nucleus	20.92	24.29
TraesCS2A01G140900.1	Wheat	nucleus	19.84	23.86
TraesCS3A01G131900.1	Wheat	nucleus	18.48	21.38
TraesCS5A01G308400.1	Wheat	nucleus	25.27	18.24
TraesCS4A01G204300.1	Wheat	nucleus	16.03	17.05
TraesCS6A01G203200.1	Wheat	nucleus	13.04	14.86
CDY13829	Canola	cytosol	0.27	9.09

Protein Annotations

EnsemblPlants:TraesCS2A01G105700.1	EnsemblPlantsGene:TraesCS2A01G105700	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF84	PFAM:PF00170	PFscan:PS50217
SEG:seg	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr2A:+:58125061..58129543

Molecular Weight (calculated)

39690.5 Da

IEP (calculated)

7.504

GRAVY (calculated)

-0.782

Length

368 amino acids

Sequence
(BLAST)

001: MAMPPKPGEP PKPSPGRSPS LNPSPCPLPP IPGSPQPGQP PAAAAPPRSH HRRARSEVPF RFPDADGGGF DEIGSEDDLF STFMDMDKIA GSGRDRAAET
101: SSSPPRPTKH RHSASFDGFA MGCGGPGRQD GGGGGGGVFA DVLEAKKAMS SEQLSELASV DPKRAKRILA NRQSAARSKE RKARYITELE RKVHTLQTEA
201: TTLSAQLTLF QRDTTGLSAE NTELKIRLQA MEQQAQLRDA LNNTLKQELE RLKIATGEMT KPDEAYNTGM HHVPYNPSFF QLSEQHTPQH HSSVHQLPSQ
301: FQPPHPNVPS HQMLSHPNTF PDMMQQDSLG RFQGLDIGKG SVAVKLEADA AAKSEGSSIS AGESNSTF

Best Arabidopsis Sequence Match ( AT1G06850.1 )
(BLAST)

001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY

Arabidopsis Description

AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.