Factsheet for HORVU2Hr1G017820.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G105400.1	Wheat	nucleus	69.67	69.29
TraesCS2A01G105700.1	Wheat	nucleus, plastid	69.4	69.02
TraesCS2B01G122700.1	Wheat	nucleus	69.13	68.38
HORVU3Hr1G109890.1	Barley	cytosol	10.38	61.29
Zm00001d022442_P001	Maize	nucleus	57.65	56.42
OQU90478	Sorghum	nucleus	58.2	56.35
Zm00001d007172_P001	Maize	plastid	54.64	55.25
GSMUA_Achr2P18830_001	Banana	nucleus	42.9	54.51
HORVU4Hr1G050190.1	Barley	nucleus	48.63	50.14
GSMUA_Achr6P32530_001	Banana	nucleus	39.07	44.83
HORVU4Hr1G020540.1	Barley	nucleus	26.5	30.03
Bra000195.1-P	Field mustard	nucleus	27.05	29.64
HORVU7Hr1G056230.2	Barley	nucleus	28.96	29.04
HORVU2Hr1G085560.4	Barley	nucleus, plastid	28.69	27.2
HORVU5Hr1G039870.5	Barley	nucleus, plastid	25.68	26.33
HORVU5Hr1G079160.11	Barley	vacuole	29.23	24.04
HORVU4Hr1G083000.1	Barley	nucleus	25.14	23.59
CDY13830	Canola	nucleus, plastid	19.67	23.45
HORVU4Hr1G053410.2	Barley	cytosol	22.13	21.32
HORVU3Hr1G072770.1	Barley	nucleus	15.03	20.68
KRH35159	Soybean	nucleus	17.21	19.87
HORVU5Hr1G045690.1	Barley	nucleus	12.57	19.17
HORVU7Hr1G056490.1	Barley	nucleus, plastid	26.78	18.99
HORVU5Hr1G080140.1	Barley	nucleus, plastid	21.04	16.7
HORVU3Hr1G040920.8	Barley	nucleus	12.02	14.06
HORVU1Hr1G049310.2	Barley	nucleus	15.3	13.05
HORVU5Hr1G031130.2	Barley	mitochondrion	12.3	12.5
HORVU6Hr1G051110.4	Barley	nucleus	9.84	11.18
HORVU4Hr1G016340.4	Barley	nucleus, plastid	12.02	10.68
CDY13829	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287H828	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU2Hr1G017820	EnsemblPlants:HORVU2Hr1G017820.1	InterPro:IPR004827	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690
PANTHER:PTHR13690:SF103	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B46462B	InterPro:bZIP	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:45102214..45106489

Molecular Weight (calculated)

29173.3 Da

IEP (calculated)

7.933

GRAVY (calculated)

-0.525

Length

366 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXTS
101: SSPPRPTKHR HSASFDGFAM GCGGPGGQQD GGGGGGLFAD VLEAKKAMSS EQLSELASVD PKRAKRILAN RQSAARSKER KARYITELER KVHTLQTEAT
201: TLSAQLTLFQ RDTTGLSAEN TELKIRLQAM ELQAQLRDAL NNTLKQELER LKIATGEMTK PDEAYNTGMH HVPYNPSFFQ LSEQHAPQHH SSVHQLPSQF
301: QPPHPNVPSH QMLSHPNTFP DMMQQDSLGR FQGLDIGKGS AAVKLEAEAA VRSEGSSISA GEKDLG

Best Arabidopsis Sequence Match ( AT1G06850.1 )
(BLAST)

001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY

Arabidopsis Description

AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.