Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G268700.1 Wheat nucleus 88.76 98.07
TraesCS7D01G269300.1 Wheat nucleus 88.95 97.04
Os08t0543900-00 Rice nucleus 75.39 83.84
Zm00001d031723_P002 Maize nucleus 74.42 82.58
Zm00001d052725_P001 Maize nucleus 74.42 82.4
EES15257 Sorghum nucleus 75.97 79.67
HORVU3Hr1G109890.1 Barley cytosol 8.72 72.58
GSMUA_Achr3P12290_001 Banana nucleus 47.87 49.4
HORVU4Hr1G083000.1 Barley nucleus 34.88 46.15
HORVU4Hr1G053410.2 Barley cytosol 33.91 46.05
HORVU5Hr1G080140.1 Barley nucleus, plastid 32.56 36.44
HORVU4Hr1G020540.1 Barley nucleus 22.09 35.29
HORVU4Hr1G050190.1 Barley nucleus 24.03 34.93
HORVU7Hr1G056230.2 Barley nucleus 24.22 34.25
HORVU5Hr1G079160.11 Barley vacuole 27.52 31.91
HORVU2Hr1G085560.4 Barley nucleus, plastid 23.64 31.61
HORVU5Hr1G039870.5 Barley nucleus, plastid 21.71 31.37
HORVU5Hr1G045690.1 Barley nucleus 13.18 28.33
HORVU3Hr1G072770.1 Barley nucleus 14.34 27.82
HORVU2Hr1G017820.1 Barley nucleus 18.99 26.78
HORVU3Hr1G040920.8 Barley nucleus 14.53 23.96
HORVU1Hr1G049310.2 Barley nucleus 18.41 22.14
HORVU5Hr1G031130.2 Barley mitochondrion 12.79 18.33
HORVU4Hr1G016340.4 Barley nucleus, plastid 13.95 17.48
HORVU6Hr1G051110.4 Barley nucleus 9.69 15.53
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1UniProt:A0A287WL34ncoils:CoilGO:GO:0003674GO:GO:0003700
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G056490EnsemblPlants:HORVU7Hr1G056490.1InterPro:IPR004827PFAM:PF07716PFscan:PS50217PANTHER:PTHR13690
PANTHER:PTHR13690:SF76SMART:SM00338SUPFAM:SSF57959UniParc:UPI000B46C94EInterPro:bZIPSEG:seg
Description
No Description!
Coordinates
chrchr7H:+:236127458..236134353
Molecular Weight (calculated)
55562.8 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.761
Length
516 amino acids
Sequence
(BLAST)
001: PLSPSLSLSL PHLQFEVGAW ASPLFASPSA FRRLPLPEPP SASFSMEDSS GADPARQHLS PQGGGGGQPP VPRSPTPLDL AAASAYHHRR LSPSPRPPAH
101: PQVRLPSPYG QIPSGAAAHH ARSLSQPLFF SIDSLPPPPY ADLAGPPAIP PSPPSSSSDP PPFGLPPRRA GHRRSQSDIP FGFSQLSPPL PPPAPVKREA
201: ATGQDGGRLE GDDAALYDLV NAYMDLDGMD ALNSSEDHHD DRDSHSRASG TRATSAAESS ENEAESQSTS AERKDGAKSR HCRSLSMDSF MGKLNYATCD
301: DSPKLPLPSP SGGLSRSGSG SLDGGGAASL FGTEFANGEF TEAEKKKIMA NERLAEIALT DPKRVKRILA NRQSAARSKE RKMRYIQELE HKVQVLQTEA
401: TTLSAQLTML QRDSGGLATQ NNELKIRLQA MEQQAQLRDA LNEALTGEVQ RLKLATGEIT DARMSKAGLQ QQMNSQLIQM QQLQIQQQQQ QHQQQQSSQT
501: QQAQQQQQQQ QSQQSA
Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)
001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.