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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, plastid

Predictor Summary:
  • plastid 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G108000.1 Wheat nucleus 82.28 97.98
TraesCS4A01G204300.1 Wheat nucleus 82.04 97.69
TraesCS4D01G105100.1 Wheat mitochondrion 81.31 96.82
Os11t0218000-01 Rice nucleus 70.39 79.67
KXG28232 Sorghum mitochondrion 67.72 77.93
Zm00001d049135_P001 Maize mitochondrion 65.78 77.65
HORVU5Hr1G031130.2 Barley mitochondrion 51.46 58.89
Bra035464.1-P Field mustard nucleus 22.57 52.84
VIT_12s0035g00620.t01 Wine grape nucleus 44.42 48.93
KRH43037 Soybean nucleus 42.96 47.07
KRH59143 Soybean nucleus 42.48 46.67
GSMUA_Achr8P29390_001 Banana nucleus 40.78 45.9
PGSC0003DMT400064169 Potato nucleus 40.53 45.75
CDY23807 Canola nucleus 36.89 45.24
CDY46864 Canola nucleus 36.16 44.61
CDY39913 Canola nucleus 37.62 41.78
Bra027885.1-P Field mustard nucleus 37.62 41.55
CDY29162 Canola nucleus 37.62 41.44
AT1G58110.2 Thale cress nucleus 37.14 40.91
Solyc11g020950.1.1 Tomato nucleus 32.04 40.49
VIT_18s0001g03010.t01 Wine grape nucleus 25.97 39.34
GSMUA_Achr9P00300_001 Banana nucleus 35.44 38.83
PGSC0003DMT400024003 Potato nucleus 32.52 38.62
Solyc10g044830.1.1 Tomato nucleus 22.57 37.65
GSMUA_Achr3P02820_001 Banana golgi 35.92 36.91
AT4G06598.1 Thale cress nucleus 23.54 36.6
HORVU3Hr1G109890.1 Barley cytosol 4.61 30.65
AT1G35490.1 Thale cress nucleus 20.87 28.67
HORVU5Hr1G045690.1 Barley nucleus 16.5 28.33
CDY48939 Canola nucleus 21.12 28.16
Bra034913.1-P Field mustard nucleus 15.05 27.93
HORVU3Hr1G072770.1 Barley nucleus 17.48 27.07
CDX80717 Canola nucleus, plastid 20.39 26.25
HORVU3Hr1G040920.8 Barley nucleus 18.69 24.6
HORVU6Hr1G051110.4 Barley nucleus 17.23 22.05
HORVU4Hr1G053410.2 Barley cytosol 16.02 17.37
HORVU4Hr1G020540.1 Barley nucleus 13.35 17.03
HORVU5Hr1G039870.5 Barley nucleus, plastid 14.32 16.53
HORVU4Hr1G050190.1 Barley nucleus 14.08 16.34
HORVU7Hr1G056230.2 Barley nucleus 14.32 16.16
HORVU2Hr1G085560.4 Barley nucleus, plastid 15.05 16.06
HORVU5Hr1G079160.11 Barley vacuole 16.26 15.06
HORVU4Hr1G083000.1 Barley nucleus 14.08 14.87
HORVU7Hr1G056490.1 Barley nucleus, plastid 17.48 13.95
HORVU5Hr1G080140.1 Barley nucleus, plastid 14.56 13.02
HORVU2Hr1G017820.1 Barley nucleus 10.68 12.02
HORVU1Hr1G049310.2 Barley nucleus 11.89 11.42
Protein Annotations
MapMan:15.5.4.1Gene3D:3.30.160.60UniProt:A0A287ND03ncoils:CoilGO:GO:0003674GO:GO:0003700
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU4Hr1G016340EnsemblPlants:HORVU4Hr1G016340.4InterPro:IPR004827PANTHER:PTHR13301PANTHER:PTHR13301:SF133SMART:SM00338
SUPFAM:SSF57959UniParc:UPI000B462359InterPro:bZIPSEG:seg::
Description
No Description!
Coordinates
chrchr4H:+:66855382..66861272
Molecular Weight (calculated)
45032.8 Da
IEP (calculated)
9.270
GRAVY (calculated)
-0.851
Length
412 amino acids
Sequence
(BLAST)
001: PFVSHSPPPL PSPPSPAPSS PQALIPRRLA PTNTSNCGLV RGFGCGNSGA GRLEESRPNC LVGQMMMANA KLQKQALLPP RSPFPTAAAP APSPYADHGP
101: IARPQGATHH RFGHGHGHGH HQRTSSESII EEQPSWLDDL LDEPETPVRR AGHRRSSSDS FALFDGSAAS GAFANGFEEM GGGGQAAPWG GVQEYYAKPS
201: SYGRPQGRPW EQGMPNLAGY RPGPPVPVRE KLGGHHGSLS ASRDHEHAMD KRALDELGAE RKDGGLPKYA QSEADTKRAK QQYAQRSRVR KLQYIAELEG
301: KVQSLQSEGI EVSAEMEFLT QQNIMLDLEN KALKQRLESI AQEQVIKRVQ QEMFEREIGR LRSLYQQQQQ PPQPPTLSRS NSRDLDSQFA NMSLKHKDPN
401: SGRDAVSGPL RT
Best Arabidopsis Sequence Match ( AT1G35490.1 )
(BLAST)
001: MENLRRLSNP GNFGFIGRSQ SRVPQKNMEN NISPPNNMHH HSASLDDLFT EDQPAWLDEL LSEPASPKIN KGHRRSASDT AAYLNSALMP SKENHVAGSS
101: WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV
201: LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI
Arabidopsis Description
BZIP family transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUZ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.