CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43037	Soybean	nucleus	96.0	95.74
VIT_12s0035g00620.t01	Wine grape	nucleus	70.67	70.86
PGSC0003DMT400064169	Potato	nucleus	62.13	63.84
Bra035464.1-P	Field mustard	nucleus	29.07	61.93
AT1G58110.2	Thale cress	nucleus	53.6	53.74
GSMUA_Achr8P29390_001	Banana	nucleus	52.0	53.28
CDY46864	Canola	nucleus	47.2	52.99
CDY23807	Canola	nucleus	47.47	52.98
CDY29162	Canola	nucleus	52.27	52.41
CDY39913	Canola	nucleus	51.73	52.29
Bra027885.1-P	Field mustard	nucleus	51.73	52.01
Solyc10g044830.1.1	Tomato	nucleus	33.6	51.01
TraesCS4B01G108000.1	Wheat	nucleus	46.13	50.0
TraesCS4A01G204300.1	Wheat	nucleus	46.13	50.0
Zm00001d049135_P001	Maize	mitochondrion	46.13	49.57
TraesCS4D01G105100.1	Wheat	mitochondrion	45.6	49.42
Os11t0218000-01	Rice	nucleus	47.73	49.18
KXG28232	Sorghum	mitochondrion	46.93	49.16
Zm00001d041831_P001	Maize	mitochondrion	45.07	48.56
GSMUA_Achr9P00300_001	Banana	nucleus	47.47	47.34
Os12t0194600-01	Rice	nucleus	46.4	47.15
KXG23197	Sorghum	mitochondrion	45.33	47.09
AT4G06598.1	Thale cress	nucleus	33.07	46.79
HORVU5Hr1G031130.2	Barley	mitochondrion	41.33	43.06
GSMUA_Achr3P02820_001	Banana	golgi	45.6	42.64
HORVU4Hr1G016340.4	Barley	nucleus, plastid	46.67	42.48
Zm00001d035240_P001	Maize	nucleus	20.27	33.63
KRH22317	Soybean	nucleus	25.87	31.19
KRH27307	Soybean	plastid	23.2	30.53
KRH27013	Soybean	nucleus	25.87	30.31
KRH25692	Soybean	nucleus, plastid	25.6	29.09
KRH22014	Soybean	nucleus, plastid	24.8	29.06
KRH55826	Soybean	nucleus, plastid	25.87	28.53
KRH70316	Soybean	nucleus	19.47	22.12
KRH17183	Soybean	plastid	18.93	19.61
KRH10117	Soybean	nucleus	21.6	19.29
KRH72827	Soybean	plastid	18.4	18.96
KRH23219	Soybean	nucleus	21.6	18.93
KRH64202	Soybean	nucleus	14.93	18.92
KRH53733	Soybean	nucleus	8.53	18.18
KRH29611	Soybean	nucleus	18.13	17.66
KRH61066	Soybean	nucleus, plastid	23.47	17.15
KRH30482	Soybean	nucleus	17.33	16.88
KRG98137	Soybean	nucleus	17.07	16.84
KRH35159	Soybean	nucleus	14.13	16.72
KRH24606	Soybean	nucleus	17.6	16.62
KRH24356	Soybean	nucleus	24.27	16.61
KRH29330	Soybean	nucleus	24.0	16.16
KRH08713	Soybean	nucleus	17.87	15.73
KRH17396	Soybean	nucleus	22.67	15.21
KRH05913	Soybean	nucleus	22.4	15.19
KRH51734	Soybean	nucleus	13.07	12.22

Protein Annotations

EntrezGene:100813098	MapMan:15.5.4.1	EMBL:ACUP02003303	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G168100	GO:GO:0000977
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045893	InterPro:IPR004827	UniProt:K7KQP3
EnsemblPlants:KRH59143	ProteinID:KRH59143	ProteinID:KRH59143.1	ProteinID:KRH59144.1	PANTHER:PTHR13301	PANTHER:PTHR13301:SF25
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002339B44	InterPro:bZIP	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:35861300..35865798

Molecular Weight (calculated)

42171.8 Da

IEP (calculated)

8.394

GRAVY (calculated)

-1.003

Length

375 amino acids

Sequence
(BLAST)

001: MANSKGSSGF RNFMYPGKHP LLPPKSPFPS VSQAYADYVP NPAVGLKAGN RPRDGNTHHQ RTSSESLVIE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF
101: AYIDTVNASN INYANQDEYK YKNMMSIPSW SSQDFDRSKD ARHVPVYAEM NSVKQKNRSW DSFSNAMTNP VGVPSGKDSA AFQSSGLQCT PHEADGLPPA
201: SSEKHDSVES GLQDAKPFPE KKDSSHAKSS ASETDTKRAK QQFAQRSRVR KLQYIAELER NVQVLQAEGS EVSAELEFLN QQNLILSMEN KALKQRLENI
301: AQEQLIKYLE QEVLEREIGR LRALYQQQQQ PQTQPQQQPS GSHRRTNSRD LESQFANLSL KHKDTNSGQD PALRI

Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)

001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.