Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70316 | Soybean | nucleus | 28.39 | 27.27 |
| GSMUA_Achr6P32530_001 | Banana | nucleus | 26.5 | 26.33 |
| Zm00001d029064_P001 | Maize | nucleus | 25.87 | 23.7 |
| Os03t0336200-02 | Rice | nucleus | 24.29 | 23.4 |
| GSMUA_Achr2P18830_001 | Banana | nucleus | 21.14 | 23.26 |
| OQU92641 | Sorghum | nucleus | 25.55 | 23.21 |
| HORVU4Hr1G050190.1 | Barley | nucleus | 25.55 | 22.82 |
| TraesCS4D01G171700.2 | Wheat | nucleus | 25.55 | 22.75 |
| TraesCS4B01G169600.1 | Wheat | nucleus | 25.55 | 22.75 |
| TraesCS4A01G135600.2 | Wheat | nucleus | 25.55 | 22.75 |
| Zm00001d047519_P001 | Maize | nucleus | 25.24 | 22.66 |
| KRH64202 | Soybean | nucleus | 21.14 | 22.64 |
| Bra000195.1-P | Field mustard | nucleus | 23.03 | 21.86 |
| Zm00001d007172_P001 | Maize | plastid | 24.92 | 21.82 |
| KRH53733 | Soybean | nucleus | 11.99 | 21.59 |
| KRH30482 | Soybean | nucleus | 26.18 | 21.56 |
| KRH29611 | Soybean | nucleus | 26.18 | 21.56 |
| KRH72827 | Soybean | plastid | 24.61 | 21.43 |
| KRH17183 | Soybean | plastid | 24.29 | 21.27 |
| TraesCS2D01G105400.1 | Wheat | nucleus | 24.29 | 20.92 |
| TraesCS2A01G105700.1 | Wheat | nucleus, plastid | 24.29 | 20.92 |
| TraesCS2B01G122700.1 | Wheat | nucleus | 24.29 | 20.81 |
| KRG98137 | Soybean | nucleus | 24.92 | 20.79 |
| OQU90478 | Sorghum | nucleus | 24.61 | 20.63 |
| Zm00001d022442_P001 | Maize | nucleus | 24.29 | 20.59 |
| KRH08713 | Soybean | nucleus | 27.44 | 20.42 |
| KRH24606 | Soybean | nucleus | 25.24 | 20.15 |
| KRH10117 | Soybean | nucleus | 26.18 | 19.76 |
| KRH23219 | Soybean | nucleus | 26.5 | 19.63 |
| CDY13830 | Canola | nucleus, plastid | 17.35 | 17.92 |
| HORVU2Hr1G017820.1 | Barley | nucleus | 19.87 | 17.21 |
| KRH22317 | Soybean | nucleus | 16.72 | 17.04 |
| KRH22014 | Soybean | nucleus, plastid | 17.03 | 16.88 |
| KRH27013 | Soybean | nucleus | 16.72 | 16.56 |
| KRH25692 | Soybean | nucleus, plastid | 16.4 | 15.76 |
| KRH55826 | Soybean | nucleus, plastid | 16.72 | 15.59 |
| KRH24356 | Soybean | nucleus | 26.18 | 15.15 |
| KRH27307 | Soybean | plastid | 13.56 | 15.09 |
| KRH29330 | Soybean | nucleus | 25.87 | 14.72 |
| KRH59143 | Soybean | nucleus | 16.72 | 14.13 |
| KRH61066 | Soybean | nucleus, plastid | 22.71 | 14.04 |
| KRH05913 | Soybean | nucleus | 23.97 | 13.74 |
| KRH17396 | Soybean | nucleus | 23.66 | 13.42 |
| KRH43037 | Soybean | nucleus | 15.77 | 13.3 |
| KRH51734 | Soybean | nucleus | 13.56 | 10.72 |
| CDY13829 | Canola | cytosol | 0.32 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:102664725 | MapMan:15.5.4.1 | EMBL:ACUP02006653 | EnsemblPlantsGene:GLYMA_10G226000 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| UniProt:K7LKX1 | EnsemblPlants:KRH35159 | ProteinID:KRH35159 | ProteinID:KRH35159.1 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF86 | SUPFAM:SSF57959 | UniParc:UPI000294DE2C | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:45653088..45657459
Molecular Weight (calculated)
35103.3 Da
IEP (calculated)
8.653
GRAVY (calculated)
-0.638
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPGFAGAPP GTAVFDQILA EEPDSSLLHR NTFSGDSFSI PDTFEDVLNF DLEQFDFDIL NSPPPSPTLP PTVTVDSASS VELKAQASEV GPVGPTAGLD
101: LGGERKGKRR LRNSYTVGAY GPLVSRGKRT MNSEELAELA RVDPKRVKRI LCNRKSAAKS KERRVIYEKD LREKVPQLAI QSANLDAKLR FLAEDTTNRD
201: VRLKQLRLTI DAMRQEAQIK DALSASVKEE LRSLRRNKHG HVGVMSSCGS VDELTSQFSS QLALQKFHNH PSSSQKHLDL PQQTQLSMPN PLPYSTTQSF
301: SGQYGPNNYF SNFNQQN
101: LGGERKGKRR LRNSYTVGAY GPLVSRGKRT MNSEELAELA RVDPKRVKRI LCNRKSAAKS KERRVIYEKD LREKVPQLAI QSANLDAKLR FLAEDTTNRD
201: VRLKQLRLTI DAMRQEAQIK DALSASVKEE LRSLRRNKHG HVGVMSSCGS VDELTSQFSS QLALQKFHNH PSSSQKHLDL PQQTQLSMPN PLPYSTTQSF
301: SGQYGPNNYF SNFNQQN
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ HNSISFNSNR CNSLCSSGFN SKNNKME
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ HNSISFNSNR CNSLCSSGFN SKNNKME
Arabidopsis Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.