CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82008	Canola	nucleus	89.9	74.19
CDY15909	Canola	plastid	65.47	45.27
CDX99610	Canola	nucleus	64.5	44.8
CDY12108	Canola	nucleus	45.28	32.63
CDX90298	Canola	nucleus	44.3	31.05
CDX72732	Canola	nucleus	44.3	30.84
CDY35020	Canola	nucleus	17.26	30.11
CDY22407	Canola	nucleus	43.32	29.89
GSMUA_Achr2P18830_001	Banana	nucleus	27.69	29.51
CDY48943	Canola	nucleus	22.8	29.05
CDY19094	Canola	nucleus	29.32	28.3
CDX86512	Canola	nucleus	28.01	27.04
CDY15590	Canola	nucleus	28.01	26.79
CDY06231	Canola	nucleus	28.34	26.77
CDY09952	Canola	nucleus	28.34	26.52
CDY10799	Canola	nucleus	31.6	26.15
Os03t0336200-02	Rice	nucleus	28.01	26.14
CDY56611	Canola	nucleus	31.27	26.09
CDY15381	Canola	nucleus	31.27	25.95
GSMUA_Achr6P32530_001	Banana	nucleus	26.38	25.39
CDX93167	Canola	nucleus	28.01	25.07
CDX86537	Canola	nucleus	31.6	24.68
CDY15560	Canola	nucleus	30.62	24.67
Zm00001d047519_P001	Maize	nucleus	28.34	24.65
OQU92641	Sorghum	nucleus	28.01	24.64
Zm00001d007172_P001	Maize	plastid	28.99	24.59
Zm00001d029064_P001	Maize	nucleus	27.69	24.57
CDY23889	Canola	nucleus	28.34	24.51
CDY06974	Canola	nucleus	28.01	24.43
CDY30752	Canola	nucleus	26.06	24.24
CDX80722	Canola	nucleus	25.41	24.22
Zm00001d022442_P001	Maize	nucleus	29.32	24.06
CDX79976	Canola	nucleus	27.69	23.88
OQU90478	Sorghum	nucleus	29.32	23.81
CDY71925	Canola	nucleus	19.54	23.62
HORVU4Hr1G050190.1	Barley	nucleus	27.04	23.38
TraesCS4A01G135600.2	Wheat	nucleus	27.04	23.31
TraesCS4B01G169600.1	Wheat	nucleus	27.04	23.31
TraesCS4D01G171700.2	Wheat	nucleus	27.04	23.31
CDY47713	Canola	nucleus	29.64	23.21
CDY10170	Canola	nucleus	29.64	23.16
TraesCS2D01G105400.1	Wheat	nucleus	27.36	22.83
TraesCS2A01G105700.1	Wheat	nucleus, plastid	27.36	22.83
CDY24896	Canola	nucleus	25.08	22.71
TraesCS2B01G122700.1	Wheat	nucleus	27.04	22.43
CDY07597	Canola	nucleus	22.8	20.96
CDX71974	Canola	nucleus, plastid	17.26	19.85
CDY64520	Canola	nucleus, plastid	17.59	19.78
CDY22561	Canola	nucleus, plastid	17.26	19.78
HORVU2Hr1G017820.1	Barley	nucleus	23.45	19.67
CDX71000	Canola	nucleus, plastid	17.59	19.35
CDX79872	Canola	nucleus, plastid	17.59	19.29
CDY35379	Canola	nucleus, plastid	16.61	19.03
CDY06053	Canola	nucleus	17.26	18.66
CDY56238	Canola	extracellular	8.14	18.66
CDX98266	Canola	nucleus, plastid	17.26	17.79
KRH35159	Soybean	nucleus	17.92	17.35
CDY13828	Canola	plastid	21.5	17.05
CDX82009	Canola	plastid	21.17	16.97
CDY70502	Canola	nucleus	21.17	16.84
CDY46864	Canola	nucleus	16.94	15.57
CDY23807	Canola	nucleus	16.94	15.48
CDY48939	Canola	nucleus	14.98	14.89
CDX80717	Canola	nucleus, plastid	14.98	14.38
CDY39913	Canola	nucleus	16.94	14.02
CDY29162	Canola	nucleus	16.61	13.64
CDX70198	Canola	mitochondrion, nucleus	13.03	13.03
CDY44883	Canola	mitochondrion, nucleus	12.7	12.75
CDY13829	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078FHB8	UniProt:A0A078FHB8	EnsemblPlants:CDY13830	ProteinID:CDY13830
ProteinID:CDY13830.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00078275001	InterPro:IPR004827
PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0004EEA5FA	InterPro:bZIP	SEG:seg	:	:	:

Description

BnaA09g43320DBnaA09g43320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHB8]

Coordinates

chrLK032038:+:572919..574395

Molecular Weight (calculated)

34665.6 Da

IEP (calculated)

9.464

GRAVY (calculated)

-0.857

Length

307 amino acids

Sequence
(BLAST)

001: MYHSPSRVVA GGSGNLPPRN SHRRSNSDHT FVFSSMSPPL IPSKSLERSV SSCGEASDWS KLVKEEERRT FSEGYDDALR AYMRLDKLDA ERSRGRTRKM
101: TNGGSTGGDS EGESNVKRRA GGDIAPTSGH YRSVSLDSCC FREDDYSVRF GKYEFSAGDM KKIAADETLA GIVMADPKRV KRMLANRASA ARSKERETQY
201: IAKLEHKVQT LQIETTTLSA HLTYLQRDNM GLQNQNNELK FRLQSMEQQT QLRNALSEKL TEEFQRLSLV IGVPNRSESN ISNASLTPEM FQQQLRISQL
301: QHQHYNE

Best Arabidopsis Sequence Match ( AT2G21230.1 )
(BLAST)

001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.