CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70502	Canola	nucleus	96.87	96.11
CDY13828	Canola	plastid	93.47	92.51
AT2G13150.1	Thale cress	plastid	15.67	22.9
CDY19094	Canola	nucleus	18.8	22.64
CDY06974	Canola	nucleus	20.1	21.88
CDX93167	Canola	nucleus	19.58	21.87
CDX82008	Canola	nucleus	20.63	21.24
CDY13830	Canola	nucleus, plastid	16.97	21.17
CDY15909	Canola	plastid	24.54	21.17
CDY23889	Canola	nucleus	19.32	20.85
CDX99610	Canola	nucleus	23.76	20.59
CDX79976	Canola	nucleus	19.06	20.51
AT2G12940.1	Thale cress	plastid	15.67	20.41
CDY48943	Canola	nucleus	12.79	20.33
CDX90298	Canola	nucleus	22.72	19.86
CDX86512	Canola	nucleus	16.45	19.81
CDY15381	Canola	nucleus	19.06	19.73
CDX72732	Canola	nucleus	22.72	19.73
CDY12108	Canola	nucleus	21.67	19.48
CDY06231	Canola	nucleus	16.45	19.38
CDY15590	Canola	nucleus	16.19	19.31
CDY10799	Canola	nucleus	18.54	19.14
CDY22407	Canola	nucleus	22.19	19.1
CDX71974	Canola	nucleus, plastid	13.32	19.1
CDY64520	Canola	nucleus, plastid	13.58	19.05
CDY56611	Canola	nucleus	18.28	19.02
CDY06053	Canola	nucleus	14.1	19.01
CDY09952	Canola	nucleus	16.19	18.9
CDY24896	Canola	nucleus	16.71	18.88
CDX71000	Canola	nucleus, plastid	13.58	18.64
CDY15560	Canola	nucleus	18.54	18.64
CDX80722	Canola	nucleus	15.67	18.63
CDY10170	Canola	nucleus	19.06	18.58
CDX79872	Canola	nucleus, plastid	13.58	18.57
CDY07597	Canola	nucleus	16.19	18.56
CDY71925	Canola	nucleus	12.27	18.5
CDY22561	Canola	nucleus, plastid	12.79	18.28
AT2G12900.1	Thale cress	plastid	12.53	18.18
CDY13829	Canola	cytosol	0.52	18.18
CDY35020	Canola	nucleus	8.36	18.18
CDY47713	Canola	nucleus	18.54	18.11
CDX86537	Canola	nucleus	18.54	18.07
CDY35379	Canola	nucleus, plastid	12.53	17.91
CDX98266	Canola	nucleus, plastid	13.58	17.45
CDY30752	Canola	nucleus	14.88	17.27
CDY46864	Canola	nucleus	14.62	16.77
CDY23807	Canola	nucleus	14.62	16.67
TraesCS5B01G308800.1	Wheat	plastid	19.58	16.06
HORVU5Hr1G080140.1	Barley	nucleus, plastid	19.32	16.05
TraesCS5D01G315400.1	Wheat	plastid	19.32	15.85
CDY29162	Canola	nucleus	14.36	14.71
TraesCS5A01G308400.1	Wheat	nucleus	19.58	14.71
Os09t0520400-01	Rice	nucleus	16.97	14.57
CDY39913	Canola	nucleus	14.1	14.56
Os04t0181300-00	Rice	nucleus	16.19	14.55
CDX80717	Canola	nucleus, plastid	12.01	14.38
CDY48939	Canola	nucleus	11.49	14.24
OQU89248	Sorghum	nucleus	8.62	13.69
CDY44883	Canola	mitochondrion, nucleus	10.18	12.75
CDY56238	Canola	extracellular	4.44	12.69
CDX70198	Canola	mitochondrion, nucleus	9.66	12.05
Zm00001d007364_P001	Maize	nucleus	17.75	10.68
OQU83493	Sorghum	nucleus	18.8	9.42
OQU83785	Sorghum	plastid	13.05	7.74

Protein Annotations

MapMan:15.5.4.1	GO:A0A078D171	EnsemblPlants:CDX82009	ProteinID:CDX82009	ProteinID:CDX82009.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00136989001	InterPro:IPR004827	PFAM:PF00170	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0004EE8384	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

BnaC08g35920D

Coordinates

chrLK031826:-:1883758..1885410

Molecular Weight (calculated)

43131.9 Da

IEP (calculated)

9.440

GRAVY (calculated)

-0.856

Length

383 amino acids

Sequence
(BLAST)

001: MDRQAKNVPF QTSFVLSTHC PCPPSGQNRG SMPPPRRSSL PPLPPKRPTT ARRHQQVGLQ NFTGPRLLPP QSPVFRSWTP MSSPAPSSSF QYFQPAPPVA
101: YHNAALPPRP PTTSVSARGS AYSGNDSAVF PSMDAMKMIY PEPIEMPVGV NYSKEGHGEP TGFMDQQVYM DLDEIFDFST KDDDVARIGS GSSENNKRNA
201: GVKKRAAPSR KTRRKSVSPS VDCNNLNNWK SSVAIEKGMF TESQMNEIAR SKTLQKYVVT DPKYAKRMLS NREGARRSVK RTAQHILNLE EKVQTLEKEG
301: VTLTVHTSFA EKKKLGLEEE NKQLRIRLQE IQDQSKRANE INWVKQKGTE EVFPDWDTTM DEFLLEQLNE LNEEPETNNC GFE

Best Arabidopsis Sequence Match ( AT4G38900.2 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.