Factsheet for AT2G12900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G13150.1	Thale cress	plastid	60.61	61.07
AT2G12940.1	Thale cress	plastid	66.29	59.52
OQU89248	Sorghum	nucleus	15.91	17.43
AT1G06850.1	Thale cress	nucleus	21.97	17.21
AT2G40620.1	Thale cress	nucleus	23.48	16.89
AT1G43700.1	Thale cress	nucleus	21.59	16.72
AT1G06070.1	Thale cress	nucleus	25.76	16.08
AT2G21230.3	Thale cress	nucleus	31.06	15.62
AT2G31370.6	Thale cress	nucleus	23.11	15.33
AT3G58120.1	Thale cress	nucleus	18.56	14.89
AT4G38900.1	Thale cress	nucleus	31.06	14.83
AT2G42380.2	Thale cress	nucleus, plastid	17.8	14.64
TraesCS5D01G315400.1	Wheat	plastid	25.0	14.13
TraesCS5B01G308800.1	Wheat	plastid	23.86	13.49
HORVU5Hr1G080140.1	Barley	nucleus, plastid	23.11	13.23
TraesCS5A01G308400.1	Wheat	nucleus	25.38	13.14
Bra031173.1-P	Field mustard	plastid	18.94	12.92
CDY13828	Canola	plastid	18.56	12.66
CDX82009	Canola	plastid	18.18	12.53
CDY70502	Canola	nucleus	17.8	12.18
Os09t0520400-01	Rice	nucleus	20.45	12.11
Os04t0181300-00	Rice	nucleus	17.8	11.03
AT1G35490.1	Thale cress	nucleus	12.5	11.0
AT5G04840.1	Thale cress	plastid	12.5	10.75
AT1G58110.2	Thale cress	nucleus	14.02	9.89
AT4G06598.1	Thale cress	nucleus	9.85	9.81
Zm00001d007364_P001	Maize	nucleus	21.59	8.95
OQU83493	Sorghum	nucleus	24.24	8.38
OQU83785	Sorghum	plastid	15.15	6.19

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:815769	ProteinID:AAD20651.1	ProteinID:AAM15428.1	ProteinID:AEC06209.1
ArrayExpress:AT2G12900	EnsemblPlantsGene:AT2G12900	RefSeq:AT2G12900	TAIR:AT2G12900	RefSeq:AT2G12900-TAIR-G	EnsemblPlants:AT2G12900.1
TAIR:AT2G12900.1	Unigene:At.52722	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	RefSeq:NP_565355.1	PFAM:PF07716	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	UniProt:Q9SKG1	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000009DDD0
InterPro:bZIP	SEG:seg	:	:	:	:

Description

BZIP transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKG1]

Coordinates

chr2:+:5293897..5295480

Molecular Weight (calculated)

30071.0 Da

IEP (calculated)

9.295

GRAVY (calculated)

-0.678

Length

264 amino acids

Sequence
(BLAST)

001: MNGSDNITTP SGSRSMTQPS LASSSLPPLS PSSSTFRRNS LPSMSFSPSA PVESRDSSIK VNKNPSLPPL VDGEEDASWL EFGSSDYTDD ELNKIAKSTK
101: LQDIAKSTKL QEIVSDPKKV RRILKNRELA ASSKQRKLKY MIDLEHRIKF LENKNALIFE KIKLLEKDKT ILMNEKKEIT IQIESLEQQA QLRDALTEKL
201: HVEIERLKVI TISNEKGSVE LQRLKMETCE VLQYRREFDR SNMQGMDPNM FTWSQPNLGF YGQI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.