CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89248	Sorghum	nucleus	25.23	67.63
AT2G13150.1	Thale cress	plastid	7.89	19.47
EES08023	Sorghum	nucleus	10.06	19.12
EES15709	Sorghum	nucleus	9.75	18.05
EES15257	Sorghum	nucleus	13.62	17.89
AT2G12940.1	Thale cress	plastid	7.89	17.35
EER99183	Sorghum	nucleus	10.53	17.35
OQU92255	Sorghum	nucleus	7.89	16.72
EES14151	Sorghum	nucleus	9.6	16.23
OQU92641	Sorghum	nucleus	8.36	15.47
OQU90478	Sorghum	nucleus	8.98	15.34
EES12438	Sorghum	nucleus	8.98	15.34
KXG40277	Sorghum	nucleus	10.22	15.31
AT2G12900.1	Thale cress	plastid	6.19	15.15
EER97061	Sorghum	nucleus	11.46	14.8
EES01493	Sorghum	nucleus	6.04	14.13
CDY13828	Canola	plastid	7.89	13.18
Bra031173.1-P	Field mustard	plastid	7.89	13.18
CDX82009	Canola	plastid	7.74	13.05
CDY70502	Canola	nucleus	7.74	12.95
EES04836	Sorghum	nucleus	5.11	12.74
EES06922	Sorghum	nucleus	6.04	12.07
KXG23197	Sorghum	mitochondrion	6.19	11.08
KXG28232	Sorghum	mitochondrion	6.04	10.89
OQU83493	Sorghum	nucleus	12.85	10.86
EES00074	Sorghum	nucleus, plastid	5.42	8.5

Protein Annotations

EnsemblPlants:OQU83785	EnsemblPlantsGene:SORBI_3005G175150	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF101	ProteinID:OQU83785
ProteinID:OQU83785.1	SEG:seg	UniParc:UPI000B8BAA2D	UniProt:A0A1Z5RK02	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr5:+:65523861..65528350

Molecular Weight (calculated)

69078.2 Da

IEP (calculated)

9.857

GRAVY (calculated)

-0.567

Length

646 amino acids

Sequence
(BLAST)

001: MEQQHRKPSA SAAASSPASS GSPSSARSIH GSMSSAFLGV SSSTRSQSQS QSQSQLRRSS PSLYPPPAPL PGHLASRGSA ATTGGRGSAS GLSSSQPQFH
101: RISPSPGTAA AKRRPRPNSR ITHSLPSPFL SELSSIRRMG TNVFGDLNAT QRPLLRGQQQ QEMTRSSSSL TMPQSHHHTP IPIGGFSGFP SASQRQQALA
201: MGGLSGFAPL PLQQQQAQPS FCSLHPLPGG NLSVFPLPAS QTQNMQPSSS SSTDLPSRIF SEFEQPPASQ HFSTIFQSSS TSSDIHELPP LPESLQMPPL
301: LSQQVIEQQP VVVAPCLEPE IISLDHGDEL SALVNSFASS HGLGSTSLPT NLEDRLQLGG SGSGLSMRGA AEGGSQTWET PAGVHDKVNN GSGSSSSSSI
401: PWNCDGSKPM YSQSEERALQ ELSDLLSLWP SSASSSCNQS MGSSVAGSCQ GWADMAALAN KMDMMNIGGS SCSAGPKMPW NYSSLPTENS TSVPHVPKLI
501: LGGMDRPGLP PRPPVLGAGA SRSMSRRGRT KEQYFSDAEI EKINKDNRLK ELVKTDSKRA KSIRKYVARL KMQKANHFQD LQRRADALKI ECSSLSAQVQ
601: SRQEMFDKLK TENREAQIKL KGLKEIDELK EVLNHQLQSE LQRLIS

Best Arabidopsis Sequence Match ( AT1G06850.1 )
(BLAST)

001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY

Arabidopsis Description

AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.