CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031173.1-P	Field mustard	plastid	96.9	96.9
CDX82009	Canola	plastid	92.51	93.47
CDY70502	Canola	nucleus	89.41	89.64
AT2G13150.1	Thale cress	plastid	16.02	23.66
CDY19094	Canola	nucleus	18.09	22.01
CDY13830	Canola	nucleus, plastid	17.05	21.5
CDX82008	Canola	nucleus	20.41	21.24
CDY48943	Canola	nucleus	12.92	20.75
CDY15909	Canola	plastid	23.77	20.72
AT2G12940.1	Thale cress	plastid	15.5	20.41
CDY06974	Canola	nucleus	18.35	20.17
CDX99610	Canola	nucleus	23.0	20.14
CDX93167	Canola	nucleus	17.83	20.12
CDX90298	Canola	nucleus	22.48	19.86
CDX71974	Canola	nucleus, plastid	13.7	19.85
CDY06053	Canola	nucleus	14.47	19.72
CDY23889	Canola	nucleus	18.09	19.72
CDX72732	Canola	nucleus	22.22	19.5
CDY12108	Canola	nucleus	21.45	19.48
CDY64520	Canola	nucleus, plastid	13.7	19.41
CDY15381	Canola	nucleus	18.35	19.19
CDY22561	Canola	nucleus, plastid	13.18	19.03
CDX71000	Canola	nucleus, plastid	13.7	19.0
CDX80722	Canola	nucleus	15.76	18.94
CDX79872	Canola	nucleus, plastid	13.7	18.93
CDY15560	Canola	nucleus	18.6	18.9
CDY22407	Canola	nucleus	21.71	18.88
CDX86512	Canola	nucleus	15.5	18.87
CDX79976	Canola	nucleus	17.31	18.82
CDY35379	Canola	nucleus, plastid	12.92	18.66
CDY10799	Canola	nucleus	17.83	18.6
CDY24896	Canola	nucleus	16.28	18.58
CDY07597	Canola	nucleus	16.02	18.56
AT2G12900.1	Thale cress	plastid	12.66	18.56
CDY56611	Canola	nucleus	17.57	18.48
CDY06231	Canola	nucleus	15.5	18.46
CDY15590	Canola	nucleus	15.25	18.38
CDY10170	Canola	nucleus	18.6	18.32
CDY13829	Canola	cytosol	0.52	18.18
CDX98266	Canola	nucleus, plastid	13.95	18.12
CDY71925	Canola	nucleus	11.89	18.11
CDX86537	Canola	nucleus	18.35	18.07
CDY09952	Canola	nucleus	15.25	17.99
CDY47713	Canola	nucleus	18.09	17.86
CDY30752	Canola	nucleus	14.73	17.27
CDY35020	Canola	nucleus	7.75	17.05
HORVU5Hr1G080140.1	Barley	nucleus, plastid	19.38	16.27
CDY46864	Canola	nucleus	13.7	15.87
TraesCS5B01G308800.1	Wheat	plastid	19.12	15.85
CDY23807	Canola	nucleus	13.7	15.77
TraesCS5D01G315400.1	Wheat	plastid	18.86	15.63
TraesCS5A01G308400.1	Wheat	nucleus	19.12	14.51
CDX80717	Canola	nucleus, plastid	11.89	14.38
Os04t0181300-00	Rice	nucleus	15.76	14.32
CDY48939	Canola	nucleus	11.37	14.24
CDY56238	Canola	extracellular	4.91	14.18
Os09t0520400-01	Rice	nucleus	16.28	14.13
OQU89248	Sorghum	nucleus	8.79	14.11
CDY29162	Canola	nucleus	13.44	13.9
CDY39913	Canola	nucleus	13.18	13.75
CDY44883	Canola	mitochondrion, nucleus	10.08	12.75
CDX70198	Canola	mitochondrion, nucleus	9.56	12.05
Zm00001d007364_P001	Maize	nucleus	18.6	11.3
OQU83493	Sorghum	nucleus	18.35	9.29
OQU83785	Sorghum	plastid	13.18	7.89

Protein Annotations

MapMan:15.5.4.1	GO:A0A078FN88	UniProt:A0A078FN88	EnsemblPlants:CDY13828	ProteinID:CDY13828	ProteinID:CDY13828.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00078273001	InterPro:IPR004827	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0004EE1E91	InterPro:bZIP	SEG:seg	:	:	:

Description

BnaA09g43300DBnaA09g43300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FN88]

Coordinates

chrLK032038:+:569009..572063

Molecular Weight (calculated)

43506.3 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.826

Length

387 amino acids

Sequence
(BLAST)

001: MDRQAKNVPF QTSFVLSTHC PCPPSGQNRG SMPPPRRSSL PPLPPKRPTT ARRHQQVGLQ NFTGPRLLPP QSPVFRSWTP MSSPAPSSSF QYFQPAPPVA
101: YHNAALPPRP PTTSVSARGS AYSGNDSAVF PSMDAMKMIY PEPIEMPVGV NYSKEGHGEP TGFMDQQVYM DLDEIFDFST KDDDVARIVS GSSENNAGVK
201: KRAAPSRKTR RKSVSPSVDC NNNWKSSVAI EKGMFTESQM NEIARSVTLQ KYVVTDPKYA KRTLSNRAAA RRSVQRTAQH ILNLEEKEQT LEKEGATLTV
301: HTRFAEKTKL GLEEENMKLR IRYQGLQDQF KRANASKECN NEEINWVKQK GKEAVFPDWG DTTMDEFLLE QLNELNEEPE TKNYGFE

Best Arabidopsis Sequence Match ( AT4G38900.2 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.