Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15909 Canola plastid 91.4 90.99
Bra030314.1-P Field mustard plastid 92.53 88.91
CDY13829 Canola cytosol 1.81 72.73
AT2G21230.3 Thale cress nucleus 79.64 67.05
CDX82008 Canola nucleus 54.98 65.32
CDY13830 Canola nucleus, plastid 44.8 64.5
VIT_18s0001g13740.t01 Wine grape nucleus 17.65 59.09
CDX72732 Canola nucleus 47.06 47.17
CDY12108 Canola nucleus 43.89 45.54
CDX90298 Canola nucleus 45.02 45.43
TraesCS5A01G491600.1 Wheat nucleus 26.24 45.31
TraesCS4D01G316900.1 Wheat nucleus 26.24 44.79
CDY22407 Canola nucleus 44.8 44.49
OQU92255 Sorghum nucleus 28.96 41.97
Zm00001d048455_P001 Maize nucleus 31.0 40.65
TraesCS1D01G191000.1 Wheat nucleus, plastid 33.94 38.86
TraesCS1B01G193800.1 Wheat nucleus 33.71 38.4
TraesCS1A01G186000.1 Wheat plastid 33.71 38.11
Os03t0127500-00 Rice nucleus 36.65 38.03
Zm00001d027461_P001 Maize plastid 36.43 37.79
Zm00001d029711_P001 Maize nucleus 33.48 37.28
Os10t0531900-01 Rice nucleus 33.48 37.0
Solyc04g081190.2.1 Tomato nucleus 37.1 36.94
KXG40277 Sorghum nucleus 35.97 36.89
PGSC0003DMT400009538 Potato nucleus 36.88 36.71
HORVU4Hr1G083000.1 Barley nucleus 31.67 35.9
CDY35020 Canola nucleus 14.25 35.8
TraesCS4B01G320400.1 Wheat nucleus 32.35 35.75
CDY48943 Canola nucleus 19.46 35.68
HORVU4Hr1G053410.2 Barley cytosol 30.32 35.26
CDY19094 Canola nucleus 25.34 35.22
GSMUA_Achr1P08090_001 Banana nucleus, plastid 35.29 33.48
CDX86512 Canola nucleus 23.98 33.33
CDY15590 Canola nucleus 24.21 33.33
KRH61066 Soybean nucleus, plastid 38.46 33.14
CDY06231 Canola nucleus 23.98 32.62
KRH05913 Soybean nucleus 40.5 32.37
CDX86537 Canola nucleus 28.73 32.32
CDY15560 Canola nucleus 27.83 32.28
CDY09952 Canola nucleus 23.76 32.01
CDY15381 Canola nucleus 26.7 31.89
KRH17396 Soybean nucleus 40.27 31.84
CDY10799 Canola nucleus 26.7 31.81
CDY56611 Canola nucleus 26.47 31.79
CDX93167 Canola nucleus 24.66 31.78
CDY06974 Canola nucleus 24.89 31.25
CDY23889 Canola nucleus 24.66 30.7
CDY10170 Canola nucleus 26.92 30.28
CDX80722 Canola nucleus 21.95 30.12
CDY47713 Canola nucleus 26.7 30.1
CDX79976 Canola nucleus 24.21 30.06
KRH51734 Soybean nucleus 26.7 29.43
CDY30752 Canola nucleus 21.72 29.09
CDY24896 Canola nucleus 21.95 28.61
CDY71925 Canola nucleus 15.61 27.17
CDY07597 Canola nucleus 19.68 26.05
CDY64520 Canola nucleus, plastid 14.93 24.18
CDX82009 Canola plastid 20.59 23.76
CDX71000 Canola nucleus, plastid 14.93 23.66
CDX71974 Canola nucleus, plastid 14.25 23.6
CDX79872 Canola nucleus, plastid 14.93 23.57
CDY22561 Canola nucleus, plastid 14.25 23.51
CDY70502 Canola nucleus 20.36 23.32
CDY13828 Canola plastid 20.14 23.0
CDY35379 Canola nucleus, plastid 13.8 22.76
CDY06053 Canola nucleus 14.48 22.54
CDX98266 Canola nucleus, plastid 14.71 21.81
CDY46864 Canola nucleus 14.93 19.76
CDY23807 Canola nucleus 14.93 19.64
CDY56238 Canola extracellular 5.88 19.4
HORVU1Hr1G049310.2 Barley nucleus 17.65 18.18
CDY29162 Canola nucleus 15.16 17.91
CDY48939 Canola nucleus 12.44 17.8
CDY39913 Canola nucleus 14.93 17.79
CDX70198 Canola mitochondrion, nucleus 11.99 17.26
CDY44883 Canola mitochondrion, nucleus 11.76 16.99
CDX80717 Canola nucleus, plastid 12.22 16.88
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1GO:A0A078EC15EnsemblPlants:CDX99610ProteinID:CDX99610ProteinID:CDX99610.1
ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00108113001InterPro:IPR004827PFAM:PF00170
PFscan:PS50217PANTHER:PTHR13690PANTHER:PTHR13690:SF76SMART:SM00338SUPFAM:SSF57959UniParc:UPI0004EDB7A7
InterPro:bZIPSEG:seg::::
Description
BnaC04g33670D
Coordinates
chrLK031912:+:333053..335527
Molecular Weight (calculated)
47524.6 Da
IEP (calculated)
9.756
GRAVY (calculated)
-0.688
Length
442 amino acids
Sequence
(BLAST)
001: MGGGSGTDAS TVQRANSSSS SIPKQPAPIT PNHHLNPPLL RSPQPFSGGG GAGNRVGAPP PIPSYSQIPA TLQLKHSRST SQPSSFFSFD SLPPLNPSPV
101: SAEERNGAGF SPSLPPSPFT MCHSSSRMVG VGGGDGENLP PRKSHRRSNS DVTFGFSSIM SPPLIPSRSL ERSEEPGEGG GRKKSESEAM DDVFRAYMNL
201: DNIDVLNSFG GNETVDSSGS EGESSVKVSS GVKRRAGGDI VPTGRHYRSV SVDSGFMGKL DLASPTNSGE GNSSVEFGNS EFTAAEMKKI SADEKLAEIV
301: MADPKRVKRI LANRVSAARS KERKTQYMAE LEHKVQTLQS EATTLSAQLT HLQRDSMGLT NQNNELKFRL QAMEQQAQLR DALSEKLTEE VQRLKMVIGE
401: TSSRSSSSRR ESNISKTTLS PEMFQQLSIS QQQMQHSKAQ IK
Best Arabidopsis Sequence Match ( AT2G21230.1 )
(BLAST)
001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.