CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027461_P001	Maize	plastid	85.85	86.85
Zm00001d048455_P001	Maize	nucleus	60.56	77.45
TraesCS5A01G491600.1	Wheat	nucleus	44.08	74.22
TraesCS4D01G316900.1	Wheat	nucleus	43.85	72.97
Os03t0127500-00	Rice	nucleus	71.46	72.3
OQU92255	Sorghum	nucleus	48.03	67.87
HORVU4Hr1G083000.1	Barley	nucleus	58.93	65.13
TraesCS4B01G320400.1	Wheat	nucleus	58.47	63.0
VIT_18s0001g13740.t01	Wine grape	nucleus	19.03	62.12
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	45.48	42.06
EES15257	Sorghum	nucleus	47.1	41.26
CDY15909	Canola	plastid	37.82	36.71
OQU92641	Sorghum	nucleus	29.23	36.1
CDX99610	Canola	nucleus	36.89	35.97
Bra030314.1-P	Field mustard	plastid	38.28	35.87
PGSC0003DMT400009538	Potato	nucleus	36.66	35.59
Solyc04g081190.2.1	Tomato	nucleus	36.19	35.14
EES08023	Sorghum	nucleus	27.61	35.0
Bra031172.1-P	Field mustard	nucleus	30.16	34.57
EER99183	Sorghum	nucleus	31.09	34.18
KRH61066	Soybean	nucleus, plastid	39.91	33.53
CDX82008	Canola	nucleus	28.77	33.33
EES15709	Sorghum	nucleus	26.68	32.95
KRH05913	Soybean	nucleus	41.53	32.37
AT2G21230.3	Thale cress	nucleus	39.21	32.19
KRH17396	Soybean	nucleus	41.53	32.02
OQU90478	Sorghum	nucleus	27.61	31.48
EES12438	Sorghum	nucleus	27.61	31.48
EES14151	Sorghum	nucleus	27.61	31.15
EES04836	Sorghum	nucleus	17.4	28.96
EES01493	Sorghum	nucleus	17.87	27.9
EER97061	Sorghum	nucleus	32.02	27.6
KRH51734	Soybean	nucleus	24.36	26.18
OQU89248	Sorghum	nucleus	12.53	22.41
KXG28232	Sorghum	mitochondrion	16.94	20.39
KXG23197	Sorghum	mitochondrion	16.47	19.67
EES00074	Sorghum	nucleus, plastid	17.63	18.45
EES06922	Sorghum	nucleus	12.99	17.34
OQU83493	Sorghum	nucleus	19.49	10.99
OQU83785	Sorghum	plastid	15.31	10.22

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1B6QQT3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlants:KXG40277	ProteinID:KXG40277
ProteinID:KXG40277.1	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF88	SMART:SM00338
EnsemblPlantsGene:SORBI_3001G522500	SUPFAM:SSF57959	UniParc:UPI00081ABAF8	InterPro:bZIP	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:78740772..78743475

Molecular Weight (calculated)

46263.4 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.629

Length

431 amino acids

Sequence
(BLAST)

001: MNDAHAHAAM MQQALGMSLP MAQFLPDQGS AKLTRPPGLP PTPPQAFAAL QRGDVCMEAV VDPAAQQQGP RKAHRRSRSD VPFGYFPPAS GGGGHGHHQL
101: PPPKVEAGWG GGHLHGGGGG DEDLFNAYLN LEGLDGLNSS DDRHDDGDSR GSSMKTNGAD SSENESDECA ADSRAGIRLW SEAAVAAAAD RREGLKRTAA
201: GEPAAAPLPR HARSLSMDSL IGKLNFSAGA TGAASGVIPG PNMFKLEFGS GEFTPGEMKK IMADDKLAEM ALADPKRVKR VLANRQSAAR SKERKMRYIA
301: ELEQKVQILQ TEATTLSAQL TLLQRDSAGI ATQNNELKFR LQAMEQQAQL RDALNEALTG ELQRLKVATA ELGDSCSSNN LAQQIQISVQ EQMFQLHQHQ
401: QQQQQQATPI PFYQLQQAQQ NGAGMKHESK E

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.