CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83785	Sorghum	plastid	67.63	25.23
OQU92255	Sorghum	nucleus	21.58	17.05
AT2G13150.1	Thale cress	plastid	18.26	16.79
AT2G12900.1	Thale cress	plastid	17.43	15.91
AT2G12940.1	Thale cress	plastid	18.67	15.31
EES08023	Sorghum	nucleus	21.58	15.29
EES15709	Sorghum	nucleus	21.58	14.9
OQU92641	Sorghum	nucleus	20.33	14.04
OQU90478	Sorghum	nucleus	20.33	12.96
KXG40277	Sorghum	nucleus	22.41	12.53
EER99183	Sorghum	nucleus	20.33	12.5
EES01493	Sorghum	nucleus	14.11	12.32
EES15257	Sorghum	nucleus	24.9	12.2
EES12438	Sorghum	nucleus	19.09	12.17
EES04836	Sorghum	nucleus	12.45	11.58
EES14151	Sorghum	nucleus	17.84	11.26
EER97061	Sorghum	nucleus	23.24	11.2
CDY13828	Canola	plastid	14.11	8.79
Bra031173.1-P	Field mustard	plastid	14.11	8.79
CDX82009	Canola	plastid	13.69	8.62
CDY70502	Canola	nucleus	13.69	8.55
EES06922	Sorghum	nucleus	10.37	7.74
EES00074	Sorghum	nucleus, plastid	12.45	7.28
OQU83493	Sorghum	nucleus	21.99	6.94
KXG28232	Sorghum	mitochondrion	9.96	6.7
KXG23197	Sorghum	mitochondrion	9.13	6.09

Protein Annotations

EnsemblPlants:OQU89248	EnsemblPlantsGene:SORBI_3002G164866	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	InterPro:bZIP
ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF101	ProteinID:OQU89248	ProteinID:OQU89248.1	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0009DC89E5	UniProt:A0A1W0W4B3	MapMan:15.5.4.1	:	:

Description

hypothetical protein

Coordinates

chr2:+:51294198..51296682

Molecular Weight (calculated)

26810.2 Da

IEP (calculated)

9.861

GRAVY (calculated)

-0.662

Length

241 amino acids

Sequence
(BLAST)

001: MPTLSEEQAL KQLSHLVSLW SSTESNSCNQ SMGSSIEGGC QGSAAMPALV NKFDIMSIGN SSCSGRPQMP RNYGSLSAEN SNPAPVVPKL ILGGMDRPGL
101: PLQLPAHGAD ASRSISRRGR TKEHFFSEAD MEKINKDNRL KELMKTEPKR VKRALRNRES VARLKMQKAK HFQDLKCRTN ALKMECSSLS AQVQSRQEIF
201: DSLKTENREL QIKLEGLNEQ ANLSQALNDQ LQSEIERLKL L

Best Arabidopsis Sequence Match ( AT2G21230.1 )
(BLAST)

001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.