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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 4
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049135_P001 Maize mitochondrion 92.74 95.13
Os11t0218000-01 Rice nucleus 82.12 80.77
TraesCS4B01G108000.1 Wheat nucleus 77.93 80.64
TraesCS4A01G204300.1 Wheat nucleus 77.37 80.06
TraesCS4D01G105100.1 Wheat mitochondrion 76.54 79.19
HORVU4Hr1G016340.4 Barley nucleus, plastid 77.93 67.72
KXG23197 Sorghum mitochondrion 68.16 67.59
Bra035464.1-P Field mustard nucleus 25.98 52.84
VIT_12s0035g00620.t01 Wine grape nucleus 51.96 49.73
GSMUA_Achr8P29390_001 Banana nucleus 49.44 48.36
KRH43037 Soybean nucleus 49.44 47.07
KRH59143 Soybean nucleus 49.16 46.93
CDY23807 Canola nucleus 42.74 45.54
CDY46864 Canola nucleus 42.18 45.21
PGSC0003DMT400064169 Potato nucleus 46.09 45.21
Bra027885.1-P Field mustard nucleus 44.97 43.16
CDY39913 Canola nucleus 44.41 42.86
CDY29162 Canola nucleus 44.41 42.51
AT1G58110.2 Thale cress nucleus 43.3 41.44
Solyc11g020950.1.1 Tomato nucleus 37.15 40.8
GSMUA_Achr9P00300_001 Banana nucleus 41.9 39.89
PGSC0003DMT400024003 Potato nucleus 38.55 39.77
VIT_18s0001g03010.t01 Wine grape nucleus 29.33 38.6
GSMUA_Achr3P02820_001 Banana golgi 41.06 36.66
AT4G06598.1 Thale cress nucleus 26.82 36.23
Solyc10g044830.1.1 Tomato nucleus 24.86 36.03
AT1G35490.1 Thale cress nucleus 25.14 30.0
Bra034913.1-P Field mustard nucleus 18.44 29.73
EES04836 Sorghum nucleus 21.51 29.73
CDY48939 Canola nucleus 25.42 29.45
EES01493 Sorghum nucleus 22.35 28.99
CDX80717 Canola nucleus, plastid 24.58 27.5
EES06922 Sorghum nucleus 22.07 24.46
EES00074 Sorghum nucleus, plastid 23.46 20.39
EES15709 Sorghum nucleus 17.88 18.34
EES12438 Sorghum nucleus 18.99 17.99
EER99183 Sorghum nucleus 19.27 17.6
OQU92641 Sorghum nucleus 17.04 17.48
EES08023 Sorghum nucleus 16.48 17.35
OQU92255 Sorghum nucleus 14.53 17.05
KXG40277 Sorghum nucleus 20.39 16.94
EES14151 Sorghum nucleus 17.04 15.97
OQU90478 Sorghum nucleus 16.76 15.87
EES15257 Sorghum nucleus 20.11 14.63
EER97061 Sorghum nucleus 16.2 11.6
OQU89248 Sorghum nucleus 6.7 9.96
OQU83785 Sorghum plastid 10.89 6.04
OQU83493 Sorghum nucleus 11.73 5.5
Protein Annotations
MapMan:15.5.4.1UniProt:A0A1B6PRF3ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
EnsemblPlants:KXG28232ProteinID:KXG28232ProteinID:KXG28232.1ProteinID:KXG28233.1PANTHER:PTHR13301PANTHER:PTHR13301:SF133
SMART:SM00338EnsemblPlantsGene:SORBI_3005G100600SUPFAM:SSF57959UniParc:UPI0001C805CBInterPro:bZIPSEG:seg
Description
hypothetical protein
Coordinates
chr5:-:16802565..16807087
Molecular Weight (calculated)
39500.4 Da
IEP (calculated)
9.945
GRAVY (calculated)
-0.926
Length
358 amino acids
Sequence
(BLAST)
001: MMMANPKLHK QALLPPRSPF PTAAAPSPYA DRGPIARPQV GAAHHRHGHH QRTSSESFIE EQPPLWLDDL LNEPETPAAR QSGGRAGHRR SSSDSFALFD
101: GGAAGAAGAY ANGFEGMGRG GGQPAPWGGV QEYYAKPASF GRAHGRPWEQ GMPNSAGFRH GGGLPMPMKD KVGGHHGPPN VPREHDHGMD KRTPDDAGHD
201: QKVGAKEGVL PKHAQSEADN KRAKQQYAQR SRVRKLQYIA ELEGRVQALQ SEGVEVSAEM EFLTQQNIML DLENKALKQR LESLAQEQLI KRFQQEMFER
301: EIGRLRSLYQ QQQQQQQQQV PALVRSNSRD LDVQFANLSL KHKDPNSGRD ALSGPLRT
Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)
001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.