Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43037 | Soybean | nucleus | 47.55 | 33.51 |
| VIT_12s0035g00620.t01 | Wine grape | nucleus | 47.17 | 33.42 |
| KRH59143 | Soybean | nucleus | 46.79 | 33.07 |
| AT1G58110.2 | Thale cress | nucleus | 44.91 | 31.82 |
| PGSC0003DMT400064169 | Potato | nucleus | 43.4 | 31.51 |
| Os11t0218000-01 | Rice | nucleus | 38.87 | 28.3 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 36.6 | 28.03 |
| TraesCS4D01G105100.1 | Wheat | mitochondrion | 36.23 | 27.75 |
| TraesCS4B01G108000.1 | Wheat | nucleus | 36.23 | 27.75 |
| Zm00001d041831_P001 | Maize | mitochondrion | 36.23 | 27.59 |
| Zm00001d049135_P001 | Maize | mitochondrion | 36.23 | 27.51 |
| GSMUA_Achr9P00300_001 | Banana | nucleus | 38.11 | 26.86 |
| KXG28232 | Sorghum | mitochondrion | 36.23 | 26.82 |
| GSMUA_Achr8P29390_001 | Banana | nucleus | 36.98 | 26.78 |
| Solyc10g044830.1.1 | Tomato | nucleus | 24.91 | 26.72 |
| KXG23197 | Sorghum | mitochondrion | 35.85 | 26.32 |
| Os12t0194600-01 | Rice | nucleus | 35.85 | 25.75 |
| GSMUA_Achr3P02820_001 | Banana | golgi | 37.36 | 24.69 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 36.6 | 23.54 |
| HORVU5Hr1G031130.2 | Barley | mitochondrion | 30.94 | 22.78 |
| AT1G35490.1 | Thale cress | nucleus | 21.13 | 18.67 |
| AT3G58120.1 | Thale cress | nucleus | 23.02 | 18.54 |
| AT2G42380.2 | Thale cress | nucleus, plastid | 21.89 | 18.07 |
| Zm00001d035240_P001 | Maize | nucleus | 13.58 | 15.93 |
| AT5G04840.1 | Thale cress | plastid | 17.74 | 15.31 |
| AT1G06850.1 | Thale cress | nucleus | 17.74 | 13.95 |
| AT2G13150.1 | Thale cress | plastid | 12.45 | 12.6 |
| AT1G43700.1 | Thale cress | nucleus | 14.72 | 11.44 |
| AT1G06070.1 | Thale cress | nucleus | 18.11 | 11.35 |
| AT2G31370.6 | Thale cress | nucleus | 16.98 | 11.31 |
| AT2G40620.1 | Thale cress | nucleus | 14.72 | 10.63 |
| AT2G12900.1 | Thale cress | plastid | 9.81 | 9.85 |
| AT2G21230.3 | Thale cress | nucleus | 18.87 | 9.52 |
| AT2G12940.1 | Thale cress | plastid | 10.57 | 9.52 |
| AT4G38900.1 | Thale cress | nucleus | 18.87 | 9.04 |
Protein Annotations
| MapMan:15.5.4.1 | EntrezGene:3770020 | ProteinID:AEE82551.2 | ProteinID:ANM68034.1 | ArrayExpress:AT4G06598 | EnsemblPlantsGene:AT4G06598 |
| RefSeq:AT4G06598 | TAIR:AT4G06598 | RefSeq:AT4G06598-TAIR-G | EnsemblPlants:AT4G06598.1 | TAIR:AT4G06598.1 | ProteinID:BAB83611.1 |
| EMBL:BT002467 | RefSeq:NP_001329816.1 | RefSeq:NP_849319.3 | PO:PO:0000293 | PANTHER:PTHR13301 | PANTHER:PTHR13301:SF25 |
| UniProt:Q8W3M7 | UniParc:UPI00000AE20D | SEG:seg | : | : | : |
Description
Uncharacterized protein At4g06598 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3M7]
Coordinates
chr4:+:3663328..3664857
Molecular Weight (calculated)
29219.7 Da
IEP (calculated)
9.832
GRAVY (calculated)
-0.868
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKGSQNH RNLGCNGKQA LLPPKSPFTG GPTFSADFVP SSVIGSKAVQ KLGEGNANHH RTSSESFLIE EQPSWLDDLL NEPETPVRKG GHRRSSSDSF
101: AYVDVPVGFD VDYTLWDGGR YNNNNGFSNH VRGPKESDYL RSQPVPFYPS AHLSKQKIRP WDSLPDSGAR PNSSSGCLES SSITRSGSSG SLRDTEKAYS
201: AADSKKDFIN NFAKSSFEKR DNPLAKSATS EADTKRARQQ FAQRSRVRKI QYIAELERNV QMLQV
101: AYVDVPVGFD VDYTLWDGGR YNNNNGFSNH VRGPKESDYL RSQPVPFYPS AHLSKQKIRP WDSLPDSGAR PNSSSGCLES SSITRSGSSG SLRDTEKAYS
201: AADSKKDFIN NFAKSSFEKR DNPLAKSATS EADTKRARQQ FAQRSRVRKI QYIAELERNV QMLQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.